LOCUS BC010998 2398 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens four and a half LIM domains 1, mRNA (cDNA clone
MGC:15297 IMAGE:4039973), complete cds.
ACCESSION BC010998
VERSION BC010998.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2398)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2398)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC010998.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: n Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147646.
FEATURES Location/Qualifiers
source 1..2398
/db_xref="H-InvDB:HIT000035157"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15297 IMAGE:4039973"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_18"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2398
/gene="FHL1"
/gene_synonym="bA535K18.1"
/gene_synonym="FHL1B"
/gene_synonym="KYO-T"
/gene_synonym="SLIM1"
/db_xref="GeneID:2273"
/db_xref="HGNC:HGNC:3702"
/db_xref="MIM:300163"
CDS 209..1051
/gene="FHL1"
/gene_synonym="bA535K18.1"
/gene_synonym="FHL1B"
/gene_synonym="KYO-T"
/gene_synonym="SLIM1"
/codon_start=1
/product="four and a half LIM domains 1"
/protein_id="AAH10998.1"
/db_xref="GeneID:2273"
/db_xref="HGNC:HGNC:3702"
/db_xref="MIM:300163"
/translation="MAEKFDCHYCRDPLQGKKYVQKDGHHCCLKCFDKFCANTCVECR
KPIGADSKEVHYKNRFWHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCK
GCFKAIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAK
HCVKCNKAITSGGITYQDQPWHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVA
KKCAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANKRFVFHQEQVYCPDC
AKKL"
BASE COUNT 648 a 585 c 540 g 625 t
ORIGIN
1 cggagggggc tcagtccgca gccgccgccg ccaccgccgc gcctcggcct cggtgcaggc
61 agcggccgcc gccgccgaga cagctgcgcg ggcgagcatc cccacgcagc accttggaag
121 ttgttttcaa ccatatccag cctttgccga atacatccta tctgccacac atccagcgtg
181 aggtccctcc agctacaagg tgggcaccat ggcggagaag tttgactgcc actactgcag
241 ggatcccttg caggggaaga agtatgtgca aaaggatggc caccactgct gcctgaaatg
301 ctttgacaag ttctgtgcca acacctgtgt ggaatgccgc aagcccatcg gtgcggactc
361 caaggaggtg cactataaga accgcttctg gcatgacacc tgcttccgct gtgccaagtg
421 ccttcacccc ttggccaatg agacctttgt ggccaaggac aacaagatcc tgtgcaacaa
481 gtgcaccact cgggaggact cccccaagtg caaggggtgc ttcaaggcca ttgtggcagg
541 agatcaaaac gtggagtaca aggggaccgt ctggcacaaa gactgcttca cctgtagtaa
601 ctgcaagcaa gtcatcggga ctggaagctt cttccctaaa ggggaggact tctactgcgt
661 gacttgccat gagaccaagt ttgccaagca ttgcgtgaag tgcaacaagg ccatcacatc
721 tggaggaatc acttaccagg atcagccctg gcatgccgat tgctttgtgt gtgttacctg
781 ctctaagaag ctggctgggc agcgtttcac cgctgtggag gaccagtatt actgcgtgga
841 ttgctacaag aactttgtgg ccaagaagtg tgctggatgc aagaacccca tcactgggtt
901 tggtaaaggc tccagtgtgg tggcctatga aggacaatcc tggcacgact actgcttcca
961 ctgcaaaaaa tgctccgtga atctggccaa caagcgcttt gttttccacc aggagcaagt
1021 gtattgtccc gactgtgcca aaaagctgta aactgacagg ggctcctgtc ctgtaaaatg
1081 gcatttgaat ctcgttcttt gtgtccttac tttctgccct ataccatcaa taggggaaga
1141 gtggtccttc ccttctttaa agttctcctt ccgtcttttc tcccatttta cagtattact
1201 caaataaggg cacacagtga tcatattagc atttagcaaa aagcaaccct gcagcaaagt
1261 gaatttctgt ccggctgcaa tttaaaaatg aaaacttagg tagattgact cttctgcatg
1321 tttctcatag agcagaaaag tgctaatcat ttagccactt agtgatgtaa gcaagaagca
1381 taggagataa aacccccact gagatgcctc tcatgcctca gctgggaccc accgtgtaga
1441 cacacgacat gcaagagttg cagcggctgc tccaactcac tgctcaccct cttctgtgag
1501 caggaaaaga accctactga catgcatggt ttaacttcct catcagaact ctgcccttcc
1561 ttctgttctt ttgtgctttc aaataactaa cacgaacttc cagaaaatta acatttgaac
1621 ttagctgtaa ttctaaactg acctttcccc gtactaacgt ttggtttccc cgtgtggcat
1681 gttttctgag cgttcctact ttaaagcatg gaacatgcag gtgatttggg aagtgtagaa
1741 agacctgaga aaacgagcct gtttcagagg aacatcgtca caacgaatac ttctggaagc
1801 ttaacaaaac taaccctgct gtccttttta ttgtttttaa ttaatatttt tgttttaatt
1861 gatagcaaaa tagtttatgg gtttggaaac ttgcatgaaa atattttagc cccctcagat
1921 gttcctgcag tgctgaaatt catcctacgg aagtaaccgc aaaactctag agggggagtt
1981 gagcaggcgc cagggctgtc atcaacatgg atatgacatt tcacaacagt gactagttga
2041 atcccttgta acgtagtagt tgtctgctct ttgtccatgt gttaatgagg actgcaaagt
2101 cccttctgtt gtgattccta ggacttttcc tcaagaggaa atctggattt ccacctaccg
2161 cttacctgaa atgcaggatc acctacttac tgtattctac attattatat gacatagtat
2221 aatgagacaa tatcaaaagt aaacatgtaa tgacaataca tactaacatt cttgtaggag
2281 tggttagaga agctgatgcc tcatttctac attctgtcat tagctattat catctaacgt
2341 ttcagtgtat ccttacagaa ataaagcagc atatgaaaaa aaaaaaaaaa aaaaaaaa
//