LOCUS BC010940 1518 bp mRNA linear HUM 09-MAR-2007
DEFINITION Homo sapiens absent in melanoma 2, mRNA (cDNA clone MGC:13570
IMAGE:4080360), complete cds.
ACCESSION BC010940
VERSION BC010940.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1518)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1518)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: d Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4757733.
FEATURES Location/Qualifiers
source 1..1518
/db_xref="H-InvDB:HIT000035132"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13570 IMAGE:4080360"
/tissue_type="Brain, glioblastoma"
/clone_lib="NIH_MGC_57"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1518
/gene="AIM2"
/gene_synonym="PYHIN4"
/db_xref="GeneID:9447"
/db_xref="HGNC:HGNC:357"
/db_xref="MIM:604578"
CDS 248..1318
/gene="AIM2"
/gene_synonym="PYHIN4"
/codon_start=1
/product="AIM2 protein"
/protein_id="AAH10940.1"
/db_xref="GeneID:9447"
/db_xref="HGNC:HGNC:357"
/db_xref="MIM:604578"
/translation="MESKYKEILLLTGLDNITDEELDRFKFFLSDEFNIATGKLHTAN
RIQVATLMIQNAGAVSAVMKTIRIFQKLNYMLLAKRLQEEKEKVDKQYKSVTKPKPLS
QAEMSPAASAAIRNDVAKQRAAPKVSPHVKPEQKQMVAQQESIREGFQKRCLPVMVLK
AKKPFTFETQEGKQEMFHATVATEKEFFFVKVFNTLLKDKFIPKRIIIIARYYRHSGF
LEVNSASRVLDAESDQKVNVPLNIIRKAGETPKINTLQTQPLGTIVNGLFVVQKVTEK
KKNILFDLSDNTGKMEVLGVRNEDTMKCKEGDKVRLTFFTLSKNGEKLQLTSGVHSTI
KVIKAKKKKHREVKRTNSSQLV"
BASE COUNT 532 a 281 c 338 g 367 t
ORIGIN
1 ggggagccaa ttagagctcc agttgtcact cctacccaca ctgggcctgg gggtgaaggg
61 aagtgtttat taggggtaca tgtgaagccg tccagaagtg tcagagtctt tgtagctttg
121 aaagtcacct aggttatttg ggcatgctct cctgagtcct ctgctagtta agctctctga
181 aaagaaggtg gcagacccgg tttgctgatc gccccaggga tcaggaggct gatcccaaag
241 ttgtcagatg gagagtaaat acaaggagat actcttgcta acaggcctgg ataacatcac
301 tgatgaggaa ctggataggt ttaagttctt tctttcagac gagtttaata ttgccacagg
361 caaactacat actgcaaaca gaatacaagt agctaccttg atgattcaaa atgctggggc
421 ggtgtctgca gtgatgaaga ccattcgtat ttttcagaag ttgaattata tgcttttggc
481 aaaacgtctt caggaggaga aggagaaagt tgataagcaa tacaaatcgg taacaaaacc
541 aaagccacta agtcaagctg aaatgagtcc tgctgcatct gcagccatca gaaatgatgt
601 cgcaaagcaa cgtgctgcac caaaagtctc tcctcatgtt aagcctgaac agaaacagat
661 ggtggcccag caggaatcta tcagagaagg gtttcagaag cgctgtttgc cagttatggt
721 actgaaagca aagaagccct tcacgtttga gacccaagaa ggcaagcagg agatgtttca
781 tgctacagtg gctacagaaa aggaattctt ctttgtaaaa gtttttaata cactgctgaa
841 agataaattc attccaaaga gaataattat aatagcaaga tattatcggc acagtggttt
901 cttagaggta aatagcgcct cacgtgtgtt agatgctgaa tctgaccaaa aggttaatgt
961 cccgctgaac attatcagaa aagctggtga aaccccgaag atcaacacgc ttcaaactca
1021 gccccttgga acaattgtga atggtttgtt tgtagtccag aaggtaacag aaaagaagaa
1081 aaacatatta tttgacctaa gtgacaacac tgggaaaatg gaagtactgg gggttagaaa
1141 cgaggacaca atgaaatgta aggaaggaga taaggttcga cttacattct tcacactgtc
1201 aaaaaatgga gaaaaactac agctgacatc tggagttcat agcaccataa aggttattaa
1261 ggccaaaaaa aaaaaacata gagaagtaaa aaggaccaat tcaagccaac tggtctaagc
1321 agcatttaat tgaagaatat gtgatacagt ctcttcaatc agattgtaag ttacctgaaa
1381 gctgcagttc acaggctcct ctctccacca aattaggata gaataattgc tggataaaca
1441 aattcagaat atcaacagat gatcacaata aacatctgtt tctcattcaa aaaaaaaaaa
1501 aaaaaaaaaa aaaaaaaa
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