LOCUS BC010927 1480 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens platelet-derived growth factor receptor-like, mRNA
(cDNA clone MGC:13519 IMAGE:4278882), complete cds.
ACCESSION BC010927
VERSION BC010927.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1480)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1480)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: k Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5453871.
FEATURES Location/Qualifiers
source 1..1480
/db_xref="H-InvDB:HIT000035124"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13519 IMAGE:4278882"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1480
/gene="PDGFRL"
/gene_synonym="PDGRL"
/gene_synonym="PRLTS"
/db_xref="GeneID:5157"
/db_xref="HGNC:HGNC:8805"
/db_xref="MIM:604584"
CDS 17..1144
/gene="PDGFRL"
/gene_synonym="PDGRL"
/gene_synonym="PRLTS"
/codon_start=1
/product="platelet-derived growth factor receptor-like"
/protein_id="AAH10927.1"
/db_xref="GeneID:5157"
/db_xref="HGNC:HGNC:8805"
/db_xref="MIM:604584"
/translation="MKVWLLLGLLLVHEALEDVTGQHLPKNKRPKEPGENRIKPTNKK
VKPKIPKMKDRDSANSAPKTQSIMMQVLDKGRFQKPAATLSLLAGQTVELRCKGSRIG
WSYPAYLDTFKDSRLSVKQNERYGQLTLVNSTSADTGEFSCWVQLCSGYICRKDEAKT
GSTYIFFTEKGELFVPSPSYFDVVYLNPDRQAVVPCRVTVLSAKVTLHREFPAKEIPA
NGTDIVYDMKRGFVYLQPHSEHQGVVYCRAEAGGRSQISVKYQLLYVAVPSGPPSTTI
LASSNKVKSGDDISVLCTVLGEPDVEVEFTWIFPGQKDERPVTIQDTWRLIHRGLGHT
TRISQSVITVEDFETIDAGYYICTAQNLQGQTTVATTVEFS"
BASE COUNT 414 a 357 c 368 g 341 t
ORIGIN
1 gggggaggtt cccgagatga aggtctggct gctgcttggt cttctgctgg tgcacgaagc
61 gctggaggat gttactggcc aacaccttcc caagaacaag cgtccaaaag aaccaggaga
121 gaatagaatc aaacctacca acaagaaggt gaagcccaaa attcctaaaa tgaaggacag
181 ggactcagcc aattcagcac caaagacgca gtctatcatg atgcaagtgc tggataaagg
241 tcgcttccag aaacccgccg ctaccctgag tctgctggcg gggcaaactg tagagcttcg
301 atgtaaaggg agtagaattg ggtggagcta ccctgcgtat ctggacacct ttaaggattc
361 tcgcctcagc gtcaagcaga atgagcgcta cggccagttg actctggtca actccacctc
421 ggcagacaca ggtgaattca gctgctgggt gcagctctgc agcggctaca tctgcaggaa
481 ggacgaggcc aaaacgggct ccacctacat cttttttaca gagaaaggag aactctttgt
541 accttctccc agctacttcg atgttgtcta cttgaacccg gacagacagg ctgtggttcc
601 ttgtcgggtg accgtgctgt cggccaaagt cacgctccac agggaattcc cagccaagga
661 gatcccagcc aatggaacgg acattgttta tgacatgaag cggggctttg tgtatctgca
721 acctcattcc gagcaccagg gtgtggttta ctgcagggcg gaggccgggg gcagatctca
781 gatctccgtc aagtaccagc tgctctacgt ggcggttccc agtggccctc cctcaacaac
841 catcttggct tcttcaaaca aagtgaaaag tggggacgac atcagtgtgc tctgcactgt
901 cctgggggag cccgatgtgg aggtggagtt cacctggatc ttcccagggc agaaggatga
961 aaggcctgtg acgatccaag acacttggag gttgatccac agaggactgg gacacaccac
1021 gagaatctcc cagagtgtca ttacagtgga agacttcgag acgattgatg caggatatta
1081 catttgcact gctcagaatc ttcaaggaca gaccacagta gctaccactg ttgagttttc
1141 ctgacttgga aaaggaaatg taatgaactt atggaaagcc catttgtgta cacagtcagc
1201 tttggggttc cttttattag tgctttgcca gaggctgatg tcaagcacca caccccaacc
1261 ccagcgtctc gtgagtccga cccagacatc caaactaaaa ggaagtcatc cagtctattc
1321 acagaagtgt taacttttct aacagaaagc atgattttga ttgcttacct acatacgtgt
1381 tcctagtttt tatacatgtg taaacaattt tatataatca atcatttcta ttaaatgagc
1441 acgtttttct aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//