LOCUS BC010871 2434 bp mRNA linear HUM 11-AUG-2005
DEFINITION Homo sapiens SH3-binding domain protein 5-like, mRNA (cDNA clone
IMAGE:3878600), partial cds.
ACCESSION BC010871
VERSION BC010871.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2434)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2434)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: c Column: 12.
FEATURES Location/Qualifiers
source 1..2434
/db_xref="H-InvDB:HIT000087555"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3878600"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2434
/gene="SH3BP5L"
/gene_synonym="KIAA1720"
/db_xref="GeneID:80851"
CDS <1..943
/gene="SH3BP5L"
/gene_synonym="KIAA1720"
/codon_start=2
/product="SH3BP5L protein"
/protein_id="AAH10871.1"
/db_xref="GeneID:80851"
/translation="LDEARTTYRRILQESARKLNTQGSHLGSCIEKARPYYEARRLAK
EAQQETQKAALRYERAVSMHNAAREMVFVAEQGVMADKNRLDPTWQEMLNHATCKVNE
AEEERLRGEREHQRVTRLCQQAEARVQALQKTLRRAIGKSRPYFELKAQFSQILEEHK
AKVTELEQQVAQAKTRYSVALRNLEQISEQIHARRRGGLPPHPLGPRRSSPVGAEAGP
EDMEDGDSGIEGAEGAGLEEGSSLGPGPAPDTDTLSLLSLRTVASDLQKCDSVEHLRG
LSDHVSLDGQELGTRSGGRRGSDGGARGGRHQRSVSL"
BASE COUNT 487 a 706 c 754 g 487 t
ORIGIN
1 gctggatgag gccaggacca cctatcggag gatcctacag gagtcggcga ggaaactgaa
61 tacacagggt tcccacttgg ggagctgcat cgagaaagcc cggccctact atgaggctcg
121 gcggctggct aaggaggctc agcaggagac acagaaggca gcgctgcggt acgagcgggc
181 cgtaagcatg cacaacgctg ctcgagaaat ggtgtttgtg gctgagcagg gcgtcatggc
241 tgacaagaac cgactggacc ccacgtggca ggagatgctg aaccatgcta cctgcaaggt
301 gaatgaggcg gaggaagagc ggcttcgagg tgagcgggag caccagcgag tgactcggct
361 gtgccaacag gctgaggctc gggtccaagc cctgcagaag accctccgga gggccatcgg
421 caagagccgc ccctactttg agctcaaggc ccagttcagc cagatcctgg aggagcacaa
481 ggccaaggtg acagaactgg agcagcaggt agctcaggcc aagacgcgct actccgtggc
541 ccttcgtaac ctggagcaga tcagcgagca gattcacgca cggcgccgcg ggggtctgcc
601 tccccacccc ctgggccctc ggcgctcctc ccccgtgggg gccgaggcag gacccgagga
661 catggaggac ggagacagcg ggattgaggg ggccgagggt gcggggctgg aggagggcag
721 cagcctgggg cccggccccg cccccgacac cgataccctg agtctgctga gcctgcgcac
781 ggtggcttca gacctgcaga agtgcgactc cgtggagcac ttgcgaggcc tctcggacca
841 cgtcagtctg gacggccaag agctgggaac gcggagtgga gggcgccggg gcagcgacgg
901 cggagcccgt gggggtcggc accagcgcag cgtcagcctg tagccgaggg gccagggttc
961 ctggcttgaa tctgccacca cgggccggtt ggggcccaca gtcttctcac gccctctcct
1021 ctggggcctc gtcttcccga aggtcccctt ctccagtgct tccctgggag aggccagctg
1081 tgttcgagtc ctctgtgcct gccctggcgt tctcacagcc tcccccttcc cctcagcagg
1141 cggctctctt tgccttaccc attcagaagg ctcgccctcg gcgctctgtc tgcctctgcc
1201 tgccagctca tcacgatctg cagggcattg accctttgct ttccctttct gctccctctc
1261 tttccatctg tttggctttt tccctcaggg aacttggtct agaaggcact gggaagctca
1321 tcagagaaaa tgggtgctgg gcctgagtac tcccgtcgga ggggatggac agtcacccct
1381 cccgttggtt tccagccccg ccccccttcc caaggcaact ctggagggta ccctaggtat
1441 gctgctgagc cctgcccccc gtcctgctcc agcctgcccg tgtgtaacct gtaagatgta
1501 ctgtgtgcct ccggaagaca ccacctttcc cttcagcatt ccctttcatg acctgaggca
1561 ctctgcgatg tgtgccccaa agcagaactt acagggcctg caggaagctg gtgtcaggga
1621 gagaaaccca accccactgt caacataggg agcatcacca actccagact ggctcctgtg
1681 ggtatggtgt ttccgctggg ctgggtcctc aacattgcca aggtgctagt gggtccctaa
1741 gagggcccat gttgggggtg aagtcatgag gtcctgaagg cttaggcccc tgtcattccc
1801 accctcactc ttgctgcaca gttgtgttta ctttttctgg gtagaggatg ctgaactgac
1861 tcagcaccct cctgcaggac ggggttaggg aatttggtgc tcaattgctc tcccttgctc
1921 ttccccaaac tgaaaatacc tactgcagga tccctcgggg cacactgaag cttggctgcc
1981 aaccctctta cttcctttgt tacagggagg ggttggcttg gggtgaaaag ttctgccctc
2041 cgcagggagc agctccagct gcctggcagt gctcccagtt tgtagggaag ccacaccaga
2101 tctgggtgcc ttgggagaac cagtccttcc ttttgaccca ccccaggaag atggagtgct
2161 cttttctagg cccatgttct gccagcaacc gggatgcgtg ggcaactgga ctctgcacgg
2221 gggtctacag gttgagggag gttggtcaca atgagaacct cggggtttga ggtggccatg
2281 ggcagacagc cgaaagggag ggagggtgtg ggtgtgcgtg tgtgcatgtg ctggtgtgta
2341 agggggaaag ggtctttcct ggttttattt aaataaagta gtttatgtaa cagttaaaaa
2401 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//