LOCUS BC010674 3619 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte), mRNA (cDNA clone MGC:9204 IMAGE:3853914), complete cds. ACCESSION BC010674 VERSION BC010674.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3619) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3619) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 13 Row: b Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 18104987. FEATURES Location/Qualifiers source 1..3619 /db_xref="H-InvDB:HIT000035043" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:9204 IMAGE:3853914" /tissue_type="Colon, adenocarcinoma" /clone_lib="NIH_MGC_65" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3619 /gene="PTPN4" /gene_synonym="PTPMEG" /gene_synonym="PTPMEG1" /db_xref="GeneID:5775" /db_xref="HGNC:HGNC:9656" /db_xref="MIM:176878" CDS 428..3208 /gene="PTPN4" /gene_synonym="PTPMEG" /gene_synonym="PTPMEG1" /codon_start=1 /product="protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)" /protein_id="AAH10674.1" /db_xref="GeneID:5775" /db_xref="HGNC:HGNC:9656" /db_xref="MIM:176878" /translation="MTSRFRLPAGRTYNVRASELARDRQHTEVVCNILLLDNTVQAFK VNKHDQGQVLLDVVFKHLDLTEQDYFGLQLADDSTDNPRWLDPNKPIRKQLKRGSPYS LNFRVKFFVSDPNKLQEEYTRYQYFLQIKQDILTGRLPCPSNTAALLASFAVQSELGD YDQSENLSGYLSDYSFIPNQPQDFEKEIAKLHQQHIGLSPAEAEFNYLNTARTLELYG VEFHYARDQSNNEIMIGVMSGGILIYKNRVRMNTFPWLKIVKISFKCKQFFIQLRKEL HESRETLLGFNMVNYRACKNLWKACVEHHTFFRLDRPLPPQKNFFAHYFTLGSKFRYC GRTEVQSVQYGKEKANKDRVFARSPSKPLARKLMDWEVVSRNSISDDRLETQSLPSRS PPGTPNHRNSTFTQEGTRLRPSSVGHLVDHMVHTSPSEVFVNQRSPSSTQANSIVLES SPSQETPGDGKPPALPPKQSKKNSWNQIHYSHSQQDLESHINETFDIPSSPEKPTPNG GIPHDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQV VLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPNAVYDVVEEKLENEPDFQYIP EKAPLDSVHQDDHSLRESMIQLAEGLITGTVLTQFDQLYRKKPGMTMSCAKLPQNISK NRYRDISPYDATRVILKGNEDYINANYINMEIPSSSIINQYIACQGPLPHTCTDFWQM TWEQGSSMVVMLTTQVERGRVKCHQYWPEPTGSSSYGCYQVTCHSEEGNTAYIFRKMT LFNQEKNESRPLTQIQYIAWPDHGVPDDSSDFLDFVCHVRNKRAGKEEPVVVHCSAGI GRTGVLITMETAMCLIECNQPVYPLDIVRTMRDQRAMMIQTPSQYRFVCEAILKVYEE GFVKPLTTSTNK" BASE COUNT 1116 a 762 c 789 g 952 t ORIGIN 1 caccaccaac attgttctct caggactcct gggtcccagg ggccggaatt gggcctgagc 61 gggagaggaa agagacttgg ctttggccgc ggggtcggag gattggggcc aggccccctc 121 ccccacgcac ttttgggggt gtggattatc tcatccctgc agggaggtag gagaggtcgc 181 cggctgcccg cctccctgcc acctccccag cggcgccggc ccgcggctgc ccagcagcat 241 gaggtggtgc tggcggctcc gggtcgtggc gcgaccgctg cggcggcggc tgctcggggg 301 gcgctgaggt agccccccgg agcggcacgg aggacgcgct tctcctctgc gcgccggggc 361 ctcgaggctt tttttctcca gccgagagga cgcggctgtg atatacgaag actttgtgtg 421 gacagtaatg acctcacgtt tccgattgcc tgctggcaga acctacaatg tacgagcatc 481 agagttggcc cgagacagac agcatactga agtggtttgc aacatccttc ttctggataa 541 cactgtacaa gctttcaaag tcaataaaca tgatcagggg caagtcttgt tggatgtcgt 601 cttcaagcat ctagatttga ctgagcagga ctattttggt ttacagttgg ctgatgattc 661 cacagataac ccaaggtggc tggatccaaa caaaccaata aggaagcagc taaagagagg 721 atctccttac agtttgaact ttagagtcaa attttttgta agtgacccca acaagttaca 781 agaagaatat acaaggtacc agtatttttt gcaaattaaa caagacattc ttactggaag 841 attaccctgt ccttctaata ctgctgccct tttagcttca tttgctgttc agtctgaact 901 tggagactac gatcagtcag agaacttgtc aggctacctc tcagattatt ctttcattcc 961 taatcaacct caagattttg aaaaagaaat tgcaaaatta catcagcaac acataggctt 1021 atctcctgca gaagcagaat ttaattacct aaacacagca cgtaccttag aactctatgg 1081 agttgaattc cactatgcaa gggatcagag taacaatgaa attatgattg gagtgatgtc 1141 aggaggaatt ctgatttata agaacagggt acgaatgaat acctttccat ggttgaagat 1201 tgtaaaaatt tcttttaagt gcaaacagtt ttttattcaa cttagaaaag aattgcatga 1261 atctagagaa acattattgg gatttaatat ggtgaattac agagcatgta aaaatttgtg 1321 gaaagcatgt gtagaacatc acacattctt ccgtttggac agaccacttc cacctcaaaa 1381 gaattttttt gcacattatt ttacattagg ttcaaaattc cggtactgtg ggagaactga 1441 agtccaatca gttcagtatg gcaaagaaaa ggcaaataaa gacagggtat ttgcaagatc 1501 cccaagtaag cccttggcac ggaaattaat ggattgggaa gtagtaagca gaaattcaat 1561 atctgatgac aggttagaaa cacaaagtct tccatcacga tctccaccgg gaactcctaa 1621 tcatcgaaat tctacattca cgcaggaagg aacccggtta cgaccatctt cagttggtca 1681 tttggtagac catatggttc atacttcccc aagcgaagtg tttgtaaatc agagatctcc 1741 gtcatcaaca caagctaata gcattgttct ggaatcatca ccatcacaag agacccctgg 1801 agatgggaag cctccagctt taccacccaa acagtcaaag aaaaacagtt ggaaccaaat 1861 tcattattca cattcgcaac aagatctaga aagtcatatt aatgaaacat ttgatattcc 1921 atcttctcct gaaaaaccca ctcctaatgg tggtattcca catgataatc ttgtcctaat 1981 cagaatgaaa cctgatgaaa atgggaggtt tggattcaat gtaaagggag gatatgatca 2041 gaagatgcct gtgattgtgt ctcgagtagc accaggaaca cctgctgacc tctgtgtccc 2101 tagactgaat gaaggggacc aagttgtact gatcaatggt cgggacattg cagaacacac 2161 tcatgatcag gttgtgctgt ttattaaagc tagttgtgag agacattctg gggaactcat 2221 gcttctagtt cgacctaatg ctgtatatga tgtagtggaa gaaaagctag aaaatgagcc 2281 agatttccag tatattcctg agaaagcccc actagatagt gtgcatcagg atgaccattc 2341 cctgcgggag tcaatgatcc agctagctga ggggcttatc actggaacag tcctgacaca 2401 gtttgatcaa ctgtatcgga aaaaacctgg aatgacaatg tcctgtgcca aattacctca 2461 gaatatttcc aaaaatagat acagagatat ttcgccttat gatgccacac gggtcatttt 2521 aaaaggtaat gaagactaca tcaatgcgaa ctatataaat atggaaattc cttcttccag 2581 cattataaat cagtacattg cttgtcaagg gccattacca cacacttgta cagatttttg 2641 gcagatgact tgggaacaag gctcctctat ggttgtaatg ttgaccacac aagttgaacg 2701 tggcagagtt aaatgtcacc aatattggcc agaacccaca ggcagttcat cttatggatg 2761 ctaccaagtt acctgccact ctgaagaagg aaacactgcc tatatcttca ggaagatgac 2821 cctatttaac caagagaaaa atgaaagtcg tccactcact cagatccagt acatagcctg 2881 gcctgaccat ggagtccctg atgattcgag tgactttcta gattttgttt gtcatgtacg 2941 aaacaagagg gctggcaagg aagaacccgt tgttgtccat tgcagtgctg gaatcggaag 3001 aactggggtt cttattacta tggaaacagc catgtgtctc attgaatgca atcagccagt 3061 ttatccacta gatattgtaa gaacaatgag agatcagcga gccatgatga tccaaacacc 3121 tagtcaatac agatttgtat gtgaagctat tttgaaagtt tatgaagaag gctttgttaa 3181 acccttaaca acatcaacaa ataaataaga aagcaaaaag atctgggata tgtgttggaa 3241 aactgctttc ccttatgttc actgtgccat aatgctgctc gcaggaaatg gcattttaca 3301 aaaaaaaaat gaagaactca aaaaaacttt gaaaacttca gcactgttgc actttatgtt 3361 ttaaaaaatg tcactctttc aaaatctata actcatgtat ttgaagactg tttcatgctt 3421 tgctccgaac aaatagtaaa taactgagta tgttcagggt aatttatgaa attttgtggt 3481 ggtgccatgc aatccccttt tggtagaatt gccacaaaca aggctcaaaa ttctcatcat 3541 ctctgttata cacctgtatc atgaaagcaa aaagaagtaa acatcaggag tcagctctga 3601 aaaaaaaaaa aaaaaaaaa //