LOCUS BC010609 2688 bp mRNA linear HUM 03-NOV-2006
DEFINITION Homo sapiens hypothetical protein FLJ22167, mRNA (cDNA clone
MGC:16805 IMAGE:4214587), complete cds.
ACCESSION BC010609
VERSION BC010609.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2688)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2688)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: n Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6912305.
FEATURES Location/Qualifiers
source 1..2688
/db_xref="H-InvDB:HIT000035009"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16805 IMAGE:4214587"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2688
/gene="FLJ22167"
/gene_synonym="ALYE870"
/gene_synonym="PRO1886"
/db_xref="GeneID:79583"
CDS 32..982
/gene="FLJ22167"
/gene_synonym="ALYE870"
/gene_synonym="PRO1886"
/codon_start=1
/product="hypothetical protein FLJ22167"
/protein_id="AAH10609.1"
/db_xref="GeneID:79583"
/translation="MALYELFSHPVERSYRAGLCSKAALFLLLAAALTYIPPLLVAFR
SHGFWLKRSSYEEQPTVRFQHQVLLVALLGPESDGFLAWSTFPAFNRLQGDRLRVPLV
STREEDRNQDGKTDMLHFKLELPLQSTEHVLGVQLILTFSYRLHRMATLVMQSMAFLQ
SSFPVPGSQLYVNGDLRLQQKQPLSCGGLDARYNISVINGTSPFAYDYDLTHIVAAYQ
ERNVTTVLNDPNPIWLVGRAADAPFVINAIIRYPVEVISYQPGFWEMVKFAWVQYVSI
LLIFLWVFERIKIFVFQNQVVTTIPVTVTPRGDLCKEHLS"
BASE COUNT 602 a 716 c 688 g 682 t
ORIGIN
1 ccggctcgcg gagtgcctgc gagcggtgct catggcgctc tatgagctct tctctcaccc
61 ggtcgagcgc agttaccgcg cggggctctg ctccaaagcc gcgctgttcc tgctgctggc
121 cgctgcgctc acgtacatcc cgccgctgct ggtggccttc cggagccacg ggttttggct
181 gaagcggagc agctacgagg agcagccgac cgtgcgcttc caacaccagg tgctgctcgt
241 ggccctgctc ggacccgaaa gcgacgggtt cctcgcctgg agcacgttcc ccgccttcaa
301 ccggctgcaa ggggatcgcc tgcgcgtccc gctcgtttcg actagagaag aagacaggaa
361 ccaggatggg aagacggaca tgttacattt taagctggag cttcccctgc agtccacgga
421 gcacgttctc ggtgtgcagc tcatcctgac tttctcctat cgattacaca ggatggcgac
481 cctcgtgatg cagagcatgg cgtttctcca gtcctccttt cctgtcccgg gatcccagtt
541 atacgtgaac ggagacctga ggctgcagca gaagcagccg ctgagctgtg gtggcctaga
601 tgcccgatac aacatatccg tgatcaacgg gaccagcccc tttgcctatg actacgacct
661 cacccatatt gttgctgcct accaggagag gaacgttacc accgtcctga atgatcccaa
721 ccccatctgg ctggtgggca gggccgcaga tgctccattt gtgattaatg ctatcatccg
781 ataccctgtg gaagtcattt cttatcagcc aggattctgg gagatggtaa agttcgcctg
841 ggtgcagtat gtcagcatcc tgcttatctt cctctgggtg tttgaaagaa tcaagatctt
901 cgtgtttcag aatcaggtgg tgaccaccat tcctgtgaca gtgacgcccc ggggagactt
961 gtgtaaggag cacttatcct agaaaggcca tttctgaaga ctcagcagga ccgtggctgc
1021 ctcattgtca tcttctggga acatcttagg accttttgaa agagcccagc ggacacctgc
1081 gggcttgtgt gcttttccct cagagacaac ggttctttcc ggttttgctc tacacagttc
1141 cgtatcttca gagctcctgc agaattgtca gggactagtt tgtggaaagg tctgagagtt
1201 cctggaggct ataattagct ttttgggttt tccttctttg ccttagcgtt gaatttcagg
1261 agaaaattgc agtcagttca gacatcttgg aaagagtccc atctctggtc aagcagagac
1321 ttttcctctg ttgaactgag gaacacactg tgcatttcta ccttctgttg tgagccactc
1381 ttactctttt cagggctctc ttgtgacaaa catgccaatc actagcactt tgcacccctg
1441 ggcttctcca tttcccattc acagctttga tttccagagc tgaggccttt aactggagac
1501 ctggaggggc agggcccaag ggcaagggcc gcattagcac aggcaatcag ggagggccgc
1561 tgaaggacac ttggaccgtc cacctgcccc agcccaacag tcagtcatct gtcatcagct
1621 cagctgagca gccctggatc tttgccgtac tgtgactggg ctctttgccc tatttttccc
1681 tctgtctgtg cccctggatg gcaggctgaa gtcagagggg ctgtttcatt ctcagccccc
1741 tcagcagcac tgggggaaga aagcattgtc acaacaggtt ctttctggcc ctcacccaac
1801 agcctgggca cttggccctc ctcctccttg acagccctcc cccttcctgc aaaggacagg
1861 ggcgacaggg gttggtgttg ggattggctc ccgctgcctg acaaccacaa gtttatttgg
1921 aaggctagcg ggaagcccag cggctggcgt ttcccttgac taaggaacag ggtgcccatc
1981 agagtggggc gggcagcttt gggaaggaca caagaagcag taagagtgta aagaggatgc
2041 tggcctgggc aggccagtcc agcctggcca ctagcagaat accaagcagt ccagtggatt
2101 accctcgtgg ctaagcaagt gtctgcagga gcagagatgg ctggaagggg cctctgcaca
2161 cggaagatgg cttgttcagc ccattcacct cctgaggatg tgggcagtct cctccaagaa
2221 cacatggagc tgcttcctga tcccaagcag gtcattgcca ctggaaggac atggccccgg
2281 tgatccatgc ttcatgccca cccagaaaca cacccctcag tgtgtgcctc agtttacttt
2341 ggagatcagt tgtcgttttt agtgctcctt taggcttact aaaacagttt tggaaacaaa
2401 gctattttga agtattcaag cagaggaatt ccctaacact gacccccttg tcttttttta
2461 atattcaggc tgttttatat gcctaaattt ttttcttaag atctaaacga aaaatagttt
2521 cttgtttaaa ttcacataag gcaatgagat atggaaagat gacaagatac gtataaacat
2581 tggtttgcat tttattaaat tattctaatg caaatcttgt ataaagaacc catgatgttt
2641 tgtaactttc taattaaaat gttcaaaatg agaaaaaaaa aaaaaaaa
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