LOCUS BC010571 3245 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens brevican, mRNA (cDNA clone IMAGE:4215184).
ACCESSION BC010571
VERSION BC010571.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3245)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3245)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: o Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38372930
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..3245
/db_xref="H-InvDB:HIT000035003"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4215184"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 669 a 1005 c 995 g 576 t
ORIGIN
1 ctgcagctgc aggactgagc cgtgcacccg gaggagaccc ccggaggagg cgacaaactt
61 cgcagtgccg cgacccaacc ccagccctgg gtagcctgca gcatggccca gctgttcctg
121 cccctgctgg cagccctggt cctggcccag gctcctgcag ctttagcaga tgttctggaa
181 ggagacagct cagaggaccg cgcttttcgc gtgcgcatcg cgggcgacgc gccactgcag
241 ggcgtgctcg gcggcgccct caccatccct tgccacgtcc actacctgcg gccaccgccg
301 agccgccggg ctgtgctggg ctctccgcgg gtcaagtgga ctttcctgtc ccggggccgg
361 gaggcagagg tgctggtggc gcggggagtg cgcgtcaagg tgaacgaggc ctaccggttc
421 cgcgtggcac tgcctacgta cccagcgtcg ctcaccgacg tctccctggc gctgaacgag
481 ctgcgcccca acgactcagg tatctatcgc tgtgaggtcc agcacggcat cgatgacagc
541 agcgacgctg tggaggtcaa ggtcaaaggg gtcgtctttc tctaccgaga gggctctgcc
601 cgctatgctt tctccttttc tggggcccag gaggcctgtg cccgcattgg agcccacatc
661 gccaccccgg agcagctcta tgccgcctac cttgggggct atgagcaatg tgatgctggc
721 tggctgtcgg atcagaccgt gaggtatccc atccagaccc cacgagaggc ctgttacgga
781 gacatggatg gcttccccgg ggtccggaac tatggtgtgg tggacccgga tgacctctat
841 gatgtgtact gttatgctga agacctaaat ggagaactgt tcctgggtga ccctccagag
901 aagctgacat tggaggaagc acgggcgtac tgccaggagc ggggtgcaga gattgccacc
961 acgggccaac tgtatgcagc ctgggatggt ggcctggacc actgcagccc agggtggcta
1021 gctgatggca gtgtgcgcta ccccatcgtc acacccagcc agcgctgtgg tgggggcttg
1081 cctggtgtca agactctctt cctcttcccc aaccagactg gcttccccaa taagcacagc
1141 cgcttcaacg tctactgctt ccgagactcg gcccagcctt ctgccatccc tgaggcctcc
1201 aacccagcct ccaacccagc ctctgatgga ctagaggcta tcgtcacagt gacagagacc
1261 ctggaggaac tgcagctgcc tcaggaagcc acagagagtg aatcccgtgg ggccatctac
1321 tccatcccca tcatggagga cggaggaggt ggaagctcca ctccagaaga cccagcagag
1381 gcccctagga cgctcctaga atttgaaaca caatccatgg taccgcccac ggggttctca
1441 gaagaggaag gtaaggcatt ggaggaagaa gagaaatatg aagatgaaga agagaaagag
1501 gaggaagaag aagaggagga ggtggaggat gaggctctgt gggcatggcc cagcgagctc
1561 agcagcccgg gccctgaggc ctctctcccc actgagccag cagcccagga gaagtcactc
1621 tcccaggcgc cagcaagggc agtcctgcag cctggtgcat caccacttcc tgatggagag
1681 tcagaagctt ccaggcctcc aagggtccat ggaccaccta ctgagactct gcccactccc
1741 agggagagga acctagcatc cccatcacct tccactctgg ttgaggcaag agaggtgggg
1801 gaggcaactg gtggtcctga gctatctggg gtccctcgag gagagagcga ggagacagga
1861 agctccgagg gtgccccttc cctgcttcca gccacacggg cccctgaggg taccagggag
1921 ctggaggccc cctctgaaga taattctgga agaactgccc cagcagggac ctcagtgcag
1981 gcccagccag tgctgcccac tgacagcgcc agccgaggtg gagtggccgt ggtccccgca
2041 tcaggtgact gtgtccccag cccctgccac aatggtggga catgcttgga ggaggaggaa
2101 ggggtccgct gcctatgtct gcctggctat gggggggacc tgtgcgatgt tggcctccgc
2161 ttctgcaacc ccggctggga cgccttccag ggcgcctgct acaagcactt ttccacacga
2221 aggagctggg aggaggcaga gacccagtgc cggatgtacg gcgcgcatct ggccagcatc
2281 agcacacccg aggaacagga cttcatcaac aaccggtacc gggagtacca gtggatcgga
2341 ctcaacgaca ggaccatcga aggcgacttc ttgtggtcgg atggcgtccc cctgctctat
2401 gagaactgga accctgggca gcctgacagc tacttcctgt ctggagagaa ctgcgtggtc
2461 atggtgtggc atgatcaggg acaatggagt gacgtgccct gcaactacca cctgtcctac
2521 acctgcaaga tggggctggt gtcctgtggg ccgccaccgg agctgcccct ggctcaagtg
2581 ttcggccgcc cacggctgcg ctatgaggtg gacactgtgc ttcgctaccg gtgccgggaa
2641 ggactggccc agcgcaatct gccgctgatc cgatgccaag agaacggtcg ttgggaggcc
2701 ccccagatct cctgtgtgcc cagaagacct gcccgagctc tgcacccaga ggaggaccca
2761 gaaggacgtc aggggaggct actgggacgc tggaaggcgc tgttgatccc cccttccagc
2821 cccatgccag gtccctaggg ggcaaggcct tgaacactgc cggccacagc actgccctgt
2881 cacccaaatt ttccctcaca cactgcgctc ccgccaccac aggaagtgac aacatgacga
2941 ggggtggtgc tggagtccag gtgacagttc ctgaaggggc ttctgggaaa tacctaggag
3001 gctccagccc agcccaggcc ctctccccct accctgggca ccagatcttc catcagggcc
3061 ggagtaaatc cctaagtgcc tcaactgccc tctccctggc agccatcttg tcccctctat
3121 tcctctaggg agcactgtgc ccactctttc tgggttttcc aagggaatgg gcttgcagga
3181 tggagtgtct gtaaaatcaa caggaaataa aactgtgtat gagcccagaa aaaaaaaaaa
3241 aaaaa
//