LOCUS BC010571 3245 bp mRNA linear HTC 27-OCT-2008 DEFINITION Homo sapiens brevican, mRNA (cDNA clone IMAGE:4215184). ACCESSION BC010571 VERSION BC010571.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3245) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3245) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 12 Row: o Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 38372930 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..3245 /db_xref="H-InvDB:HIT000035003" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4215184" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" BASE COUNT 669 a 1005 c 995 g 576 t ORIGIN 1 ctgcagctgc aggactgagc cgtgcacccg gaggagaccc ccggaggagg cgacaaactt 61 cgcagtgccg cgacccaacc ccagccctgg gtagcctgca gcatggccca gctgttcctg 121 cccctgctgg cagccctggt cctggcccag gctcctgcag ctttagcaga tgttctggaa 181 ggagacagct cagaggaccg cgcttttcgc gtgcgcatcg cgggcgacgc gccactgcag 241 ggcgtgctcg gcggcgccct caccatccct tgccacgtcc actacctgcg gccaccgccg 301 agccgccggg ctgtgctggg ctctccgcgg gtcaagtgga ctttcctgtc ccggggccgg 361 gaggcagagg tgctggtggc gcggggagtg cgcgtcaagg tgaacgaggc ctaccggttc 421 cgcgtggcac tgcctacgta cccagcgtcg ctcaccgacg tctccctggc gctgaacgag 481 ctgcgcccca acgactcagg tatctatcgc tgtgaggtcc agcacggcat cgatgacagc 541 agcgacgctg tggaggtcaa ggtcaaaggg gtcgtctttc tctaccgaga gggctctgcc 601 cgctatgctt tctccttttc tggggcccag gaggcctgtg cccgcattgg agcccacatc 661 gccaccccgg agcagctcta tgccgcctac cttgggggct atgagcaatg tgatgctggc 721 tggctgtcgg atcagaccgt gaggtatccc atccagaccc cacgagaggc ctgttacgga 781 gacatggatg gcttccccgg ggtccggaac tatggtgtgg tggacccgga tgacctctat 841 gatgtgtact gttatgctga agacctaaat ggagaactgt tcctgggtga ccctccagag 901 aagctgacat tggaggaagc acgggcgtac tgccaggagc ggggtgcaga gattgccacc 961 acgggccaac tgtatgcagc ctgggatggt ggcctggacc actgcagccc agggtggcta 1021 gctgatggca gtgtgcgcta ccccatcgtc acacccagcc agcgctgtgg tgggggcttg 1081 cctggtgtca agactctctt cctcttcccc aaccagactg gcttccccaa taagcacagc 1141 cgcttcaacg tctactgctt ccgagactcg gcccagcctt ctgccatccc tgaggcctcc 1201 aacccagcct ccaacccagc ctctgatgga ctagaggcta tcgtcacagt gacagagacc 1261 ctggaggaac tgcagctgcc tcaggaagcc acagagagtg aatcccgtgg ggccatctac 1321 tccatcccca tcatggagga cggaggaggt ggaagctcca ctccagaaga cccagcagag 1381 gcccctagga cgctcctaga atttgaaaca caatccatgg taccgcccac ggggttctca 1441 gaagaggaag gtaaggcatt ggaggaagaa gagaaatatg aagatgaaga agagaaagag 1501 gaggaagaag aagaggagga ggtggaggat gaggctctgt gggcatggcc cagcgagctc 1561 agcagcccgg gccctgaggc ctctctcccc actgagccag cagcccagga gaagtcactc 1621 tcccaggcgc cagcaagggc agtcctgcag cctggtgcat caccacttcc tgatggagag 1681 tcagaagctt ccaggcctcc aagggtccat ggaccaccta ctgagactct gcccactccc 1741 agggagagga acctagcatc cccatcacct tccactctgg ttgaggcaag agaggtgggg 1801 gaggcaactg gtggtcctga gctatctggg gtccctcgag gagagagcga ggagacagga 1861 agctccgagg gtgccccttc cctgcttcca gccacacggg cccctgaggg taccagggag 1921 ctggaggccc cctctgaaga taattctgga agaactgccc cagcagggac ctcagtgcag 1981 gcccagccag tgctgcccac tgacagcgcc agccgaggtg gagtggccgt ggtccccgca 2041 tcaggtgact gtgtccccag cccctgccac aatggtggga catgcttgga ggaggaggaa 2101 ggggtccgct gcctatgtct gcctggctat gggggggacc tgtgcgatgt tggcctccgc 2161 ttctgcaacc ccggctggga cgccttccag ggcgcctgct acaagcactt ttccacacga 2221 aggagctggg aggaggcaga gacccagtgc cggatgtacg gcgcgcatct ggccagcatc 2281 agcacacccg aggaacagga cttcatcaac aaccggtacc gggagtacca gtggatcgga 2341 ctcaacgaca ggaccatcga aggcgacttc ttgtggtcgg atggcgtccc cctgctctat 2401 gagaactgga accctgggca gcctgacagc tacttcctgt ctggagagaa ctgcgtggtc 2461 atggtgtggc atgatcaggg acaatggagt gacgtgccct gcaactacca cctgtcctac 2521 acctgcaaga tggggctggt gtcctgtggg ccgccaccgg agctgcccct ggctcaagtg 2581 ttcggccgcc cacggctgcg ctatgaggtg gacactgtgc ttcgctaccg gtgccgggaa 2641 ggactggccc agcgcaatct gccgctgatc cgatgccaag agaacggtcg ttgggaggcc 2701 ccccagatct cctgtgtgcc cagaagacct gcccgagctc tgcacccaga ggaggaccca 2761 gaaggacgtc aggggaggct actgggacgc tggaaggcgc tgttgatccc cccttccagc 2821 cccatgccag gtccctaggg ggcaaggcct tgaacactgc cggccacagc actgccctgt 2881 cacccaaatt ttccctcaca cactgcgctc ccgccaccac aggaagtgac aacatgacga 2941 ggggtggtgc tggagtccag gtgacagttc ctgaaggggc ttctgggaaa tacctaggag 3001 gctccagccc agcccaggcc ctctccccct accctgggca ccagatcttc catcagggcc 3061 ggagtaaatc cctaagtgcc tcaactgccc tctccctggc agccatcttg tcccctctat 3121 tcctctaggg agcactgtgc ccactctttc tgggttttcc aagggaatgg gcttgcagga 3181 tggagtgtct gtaaaatcaa caggaaataa aactgtgtat gagcccagaa aaaaaaaaaa 3241 aaaaa //