LOCUS BC010409 1407 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens keratin 19, mRNA (cDNA clone MGC:15366 IMAGE:3689178),
complete cds.
ACCESSION BC010409
VERSION BC010409.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1407)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1407)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC010409.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 24 Row: k Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40217850.
FEATURES Location/Qualifiers
source 1..1407
/db_xref="H-InvDB:HIT000034924"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15366 IMAGE:3689178"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1407
/gene="KRT19"
/gene_synonym="CK19"
/gene_synonym="K19"
/gene_synonym="K1CS"
/db_xref="GeneID:3880"
/db_xref="HGNC:HGNC:6436"
/db_xref="MIM:148020"
CDS 54..1256
/gene="KRT19"
/gene_synonym="CK19"
/gene_synonym="K19"
/gene_synonym="K1CS"
/codon_start=1
/product="keratin 19"
/protein_id="AAH10409.3"
/db_xref="GeneID:3880"
/db_xref="HGNC:HGNC:6436"
/db_xref="MIM:148020"
/translation="MTSYSYRQSSATSSFGGLGGGSVRFGPGVAFRAPSIHGGSGGRG
VSVSSARFVSSSSSGAYGGGYGGVLTASDGLLAGNEKLTMQNLNDRLASYLDKVRALE
AANGELEVKIRDWYQKQGPGPSRDYSHYYTTIQDLRDKILGATIENSRIVLQIDNARL
AADDFRTKFETEQALRMSVEADINGLRRVLDELTLARTDLEMQIEGLKEELAYLKKNH
EEEISTLRGQVGGQVSVEVDSAPGTDLAKILSDMRSQYEVMAEQNRKDAEAWFTSRTE
ELNREVAGHTEQLQMSRSEVTDLRRTLQGLEIELQSQLSMKAALEDTLAETEARFGAQ
LAHIQALISGIEAQLGDVRADSERQNQEYQRLMDIKSRLEQEIATYRSLLEGQEDHYN
NLSASKVL"
BASE COUNT 309 a 403 c 449 g 246 t
ORIGIN
1 cgcgaatcgc agcttctgag accagggttg ctccgtccgt gctccgcctc gccatgactt
61 cctacagcta tcgccagtcg tcggccacgt cgtccttcgg aggcctgggc ggcggctccg
121 tgcgttttgg gccgggggtc gcctttcgcg cgcccagcat tcacgggggc tccggcggcc
181 gcggcgtatc cgtgtcctcc gcccgctttg tgtcctcgtc ctcctcgggg gcctacggcg
241 gcggctacgg cggcgtcctg accgcgtccg acgggctgct ggcgggcaac gagaagctaa
301 ccatgcagaa cctcaacgac cgcctggcct cctacctgga caaggtgcgc gccctggagg
361 cggccaacgg cgagctagag gtgaagatcc gcgactggta ccagaagcag gggcctgggc
421 cctcccgcga ctacagccac tactacacga ccatccagga cctgcgggac aagattcttg
481 gtgccaccat tgagaactcc aggattgtcc tgcagatcga caatgcccgt ctggctgcag
541 atgacttccg aaccaagttt gagacggaac aggctctgcg catgagcgtt gaggccgaca
601 tcaacggcct gcgcagggtg ctggatgagc tgaccctggc caggaccgac ctggagatgc
661 agatcgaagg cctgaaggaa gagctggcct acctgaagaa gaaccatgag gaggaaatca
721 gtacgctgag gggccaagtg ggaggccagg tcagtgtgga ggtggattcc gctccgggca
781 ccgatctcgc caagatcctg agtgacatgc gaagccaata tgaggtcatg gccgagcaga
841 accggaagga tgctgaagcc tggttcacca gccggactga agaattgaac cgggaggtcg
901 ctggccacac ggagcagctc cagatgagca ggtccgaggt tactgacctg cggcgcaccc
961 ttcagggtct tgagattgag ctgcagtcac agctgagcat gaaagctgcc ttggaagaca
1021 cactggcaga aacggaggcg cgctttggag cccagctggc gcatatccag gcgctgatca
1081 gcggtattga agcccagctg ggcgatgtgc gagctgatag tgagcggcag aatcaggagt
1141 accagcggct catggacatc aagtcgcggc tggagcagga gattgccacc taccgcagcc
1201 tgctcgaggg acaggaagat cactacaaca atttgtctgc ctccaaggtc ctctgaggca
1261 gcaggctctg gggcttctgc tgtcctttgg agggtgtctt ctgggtagag ggatgggaag
1321 gaagggaccc ttacccccgg ctcttctcct gacctgccaa taaaaattta tggtccaagg
1381 gaaaaaaaaa aaaaaaaaaa aaaaaaa
//