LOCUS BC010394 1899 bp mRNA linear HUM 26-APR-2004
DEFINITION Homo sapiens FCH and double SH3 domains 2, mRNA (cDNA clone
MGC:13671 IMAGE:4091973), complete cds.
ACCESSION BC010394
VERSION BC010394.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1899)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1899)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (09-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: d Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7662295.
FEATURES Location/Qualifiers
source 1..1899
/db_xref="H-InvDB:HIT000034915"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13671 IMAGE:4091973"
/tissue_type="Bone marrow, acute myelogenous leukemia"
/clone_lib="NIH_MGC_55"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1899
/gene="FCHSD2"
/gene_synonym="KIAA0769"
/gene_synonym="SH3MD3"
/db_xref="GeneID:9873"
CDS 137..1684
/gene="FCHSD2"
/gene_synonym="KIAA0769"
/gene_synonym="SH3MD3"
/codon_start=1
/product="FCHSD2 protein"
/protein_id="AAH10394.1"
/db_xref="GeneID:9873"
/translation="MQKLASQYLKRDWPGVKADDRNDYRSMYPVWKSFLEGTMQVAQS
RMNICENYKNFISEPARTVRSLKEQQLKRCVDQLTKIQTELQETVKDLAKGKKKYFET
EQMAHAVREKADIEAKSKLSLFQSRISLQKASVKLKARRSECNSKATHARNDYLLTLA
AANAHQDRYYQTDLVNIMKALDGNVYDHLKDYLIAFSRTELETCQAVQNTFQFLLENS
SKVVRDYNLQLFLQENAVFHKPQPFQFQPCDSDTSRQLESETGTTEEHSLNKEARKWA
TRVAREHKNIVHQQRVLNDLECHGAAVSEQSRAELEQKIDEARENIRKAEIIKLKAEA
RLDLLKQIGVSVDTWLKSAMNQVMEELENERWARPPAVTSNGTLHSLNADTEREEGEE
FEDNMDVFDDSSSSPSGTLRNYPLTCKVVYSYKASQPDELTIEEHEVLEVIEDGDMED
WVKARNKVGQVGYVPEKYLQFPTSNSLLSMLQSLAALDSRSHTSSNSTEAELVSGSLN
GDASGKD"
misc_feature 1379..1546
/gene="FCHSD2"
/gene_synonym="KIAA0769"
/gene_synonym="SH3MD3"
/note="SH3; Region: Src homology 3 domains"
/db_xref="CDD:smart00326"
BASE COUNT 641 a 371 c 433 g 454 t
ORIGIN
1 gggaagcaga atgtgatttg cttgaagata tgaggacatt cagtcagaag aaggctgcta
61 ttgaaagaga gtatgcacag tattccattg tatggatata ccacagttta tccattttcc
121 tgttgatgga catggtatgc agaagttggc tagtcaatac ctgaagagag attggcctgg
181 agtaaaagct gatgatcgga atgattacag gagcatgtat cccgtttgga aatcttttct
241 cgagggaaca atgcaggtag cccagtctcg gatgaatata tgtgaaaact ataaaaactt
301 catttctgag cctgcaagga cagtgagaag cttaaaagaa cagcaactaa aaaggtgtgt
361 ggaccagttg acaaagatcc aaactgaatt acaagagaca gtgaaagatt tagctaaagg
421 caaaaagaaa tactttgaga ctgaacagat ggctcatgca gtacgagaga aagctgacat
481 cgaggcaaaa tctaaactta gtctttttca atcaagaatc agtttacaga aggcaagtgt
541 aaagttaaaa gcccggcgat ctgagtgtaa ttccaaagct acccacgcaa ggaatgatta
601 tcttcttacc ctagcggcag caaatgcaca tcaggatcgc tactatcaaa cagatttagt
661 taacattatg aaggctcttg atggaaatgt gtatgatcat ctcaaggatt atttaatagc
721 cttcagccgg actgagctag aaacatgcca agctgtgcag aacacattcc agtttttatt
781 agaaaactcc agcaaggtgg tccgggacta caatcttcag ctgtttttgc aagaaaacgc
841 tgtatttcac aaaccccagc ccttccagtt ccagccttgt gacagtgata ctagccgaca
901 gttagaatca gaaactggga ccacagagga gcacagtcta aataaggaag ctcgaaaatg
961 ggccacacgt gtggcacgtg agcataaaaa cattgttcac caacaacggg ttctaaatga
1021 tctggagtgt catggagctg ctgtatcaga acaaagccga gcagagctag aacagaaaat
1081 agatgaagct agagaaaata ttcgtaaagc agagataatt aaattgaaag ctgaagcccg
1141 gttggacctg ctaaagcaga ttggtgtttc tgtggacaca tggctaaaga gtgccatgaa
1201 ccaagtaatg gaagaactgg aaaatgagcg atgggcccgc cctcctgcag tgaccagtaa
1261 tggcacttta cactcgctta atgcagatac cgaaagagaa gaaggcgaag agtttgaaga
1321 taacatggat gttttcgatg acagcagttc cagcccttct ggcaccttaa gaaattatcc
1381 actcacctgc aaagttgttt attcctacaa ggcttctcaa ccagatgagt tgaccattga
1441 ggaacatgag gtgttagaag tgattgaaga tggagatatg gaagactggg taaaggctcg
1501 aaataaagtt ggccaagtgg gttatgtgcc agaaaagtac ctacagtttc ccacctcgaa
1561 cagcctcctg agcatgctgc agtccctggc cgctttggac agtcggtcac acacgtccag
1621 caattccacg gaagcagaac tcgtttcagg cagcctcaac ggagatgcca gtggtaaaga
1681 ctgaaacaag gcactcttta tttggtcacg tttgacctaa actgtattgc cctggagtaa
1741 gccttcagta ggataaaaag cacaactttc ctcctgtcct ataatatgct tttctttata
1801 tggtcacgtt tgtcctgcac agtagaaccc taaagttaat cattcatcag tgagtaaaaa
1861 aattacaact aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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