LOCUS BC010349 1618 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens sorting nexin 7, mRNA (cDNA clone MGC:13320 IMAGE:4093672), complete cds. ACCESSION BC010349 VERSION BC010349.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1618) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1618) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (09-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 19 Row: e Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 23111054. FEATURES Location/Qualifiers source 1..1618 /db_xref="H-InvDB:HIT000034888" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:13320 IMAGE:4093672" /tissue_type="Brain, glioblastoma" /clone_lib="NIH_MGC_57" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1618 /gene="SNX7" /gene_synonym="DKFZP564F052" /gene_synonym="MGC8717" /db_xref="GeneID:51375" /db_xref="HGNC:HGNC:14971" CDS 59..1222 /gene="SNX7" /gene_synonym="DKFZP564F052" /gene_synonym="MGC8717" /codon_start=1 /product="sorting nexin 7" /protein_id="AAH10349.1" /db_xref="GeneID:51375" /db_xref="HGNC:HGNC:14971" /translation="MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVT TIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIV KGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWELSPHKKQGPG LLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYF DEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVL YSEMLMGVMKRRDQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNALKADW ERWKQNMQNDIKLAFTDMAEENIHYYEQCLATWESFLTSQTNLHLEEASEDKP" BASE COUNT 554 a 264 c 338 g 462 t ORIGIN 1 gggggatctg gacgaggacg aggacgacct ggaggtgttc agcaaggatg cctcattgat 61 ggacatgaac tccttcagcc ctatgatgcc aacatcccct ttatcaatga taaaccaaat 121 caagtttgag gatgaaccag atttaaagga tctcttcatc acagttgatg aacctgaaag 181 tcatgttact acaatagaaa ctttcattac gtataggatt attactaaga catctcgtgg 241 ggaatttgac tccagtgaat ttgaagttag gagacgatat caagatttcc tttggttgaa 301 gggaaaactg gaagaagcac accccactct gattattcca ccattgccag aaaagtttat 361 agtaaaagga atggtggaac gctttaacga tgacttcatt gagacacgca ggaaggcttt 421 acataaattt ttgaaccgaa ttgctgatca tccaacttta acatttaatg aagacttcaa 481 aatttttctc actgcacaag cttgggaact ctctcctcac aagaagcaag gtcctggctt 541 gctaagcagg atggggcaaa ccgtcagagc tgttgcgtcc tcaatgagag gagttaaaaa 601 ccgcccagag gagttcatgg aaatgaataa ctttattgaa ctatttagcc agaaaataaa 661 tttgatagat aaaatatctc agagaattta taaggaagaa agggaatatt ttgatgaaat 721 gaaagaatat ggcccaattc atattctgtg gtcagcgtca gaagaggatc tggttgatac 781 tctaaaggat gttgccagct gcattgacag atgctgtaag gccactgaaa agcggatgtc 841 tggactctca gaggccctgc ttcctgttgt acatgagtac gtgctttata gtgaaatgtt 901 aatgggtgtt atgaaaagaa gagaccaaat acaagcagaa ctggattcca aagttgaagt 961 tttgacctat aaaaaggcag atactgatct gcttccagag gagattggaa aacttgaaga 1021 taaagtggaa tgtgctaata atgccctgaa agcagattgg gagagatgga aacaaaatat 1081 gcaaaatgat atcaagttag catttacaga tatggctgag gagaatatcc attattatga 1141 acagtgcctt gctacgtggg aatcgttcct tacatcacag accaaccttc acttggaaga 1201 agcctctgaa gataaacctt aatcccattg aggacttctg tttgatcttt gggagacagc 1261 atttattaac caaagttatt ctttctggat ctgccgtgtc cttataaagt ggatgaaaaa 1321 tgttttgtac ccatctggaa aaccaacaac ttgaaatctc aggtattcca ggtcactgac 1381 atgaatttga agatatatct atctgtatgg atatatatct atatgtatat agatatataa 1441 atacagagag atatctggct tggttttaat tatgttctta aatttgtgtg ccaataattg 1501 catatagatt ttttttctta aatatttgac tgtggaacat gccattttaa atatgttgta 1561 aggactgttt taataaaaag tttagtataa aaaaaaaaaa aaaaaaaaaa aaaaaaaa //