LOCUS BC010307 2958 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens solute carrier family 35, member A5, mRNA (cDNA clone
MGC:4949 IMAGE:3450563), complete cds.
ACCESSION BC010307
VERSION BC010307.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2958)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2958)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: n Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543636.
FEATURES Location/Qualifiers
source 1..2958
/db_xref="H-InvDB:HIT000034886"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4949 IMAGE:3450563"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2958
/gene="SLC35A5"
/gene_synonym="FLJ20730"
/db_xref="GeneID:55032"
/db_xref="HGNC:HGNC:20792"
CDS 246..1520
/gene="SLC35A5"
/gene_synonym="FLJ20730"
/codon_start=1
/product="solute carrier family 35, member A5"
/protein_id="AAH10307.1"
/db_xref="GeneID:55032"
/db_xref="HGNC:HGNC:20792"
/translation="MEKQCCSHPVICSLSTMYTFLLGAIFIALSSSRILLVKYSANEE
NKYDYLPTTVNVCSELVKLVFCVLVSFCVIKKDHQSRNLKYASWKEFSDFMKWSIPAF
LYFLDNLIVFYVLSYLQPAMAVIFSNFSIITTALLFRIVLKRRLNWIQWASLLTLFLS
IVALTAGTKTLQHNLAGRGFHHDAFFSPSNSCLLFRSECPRKDNCTAKEWTFPEAKWN
TTARVFSHIRLGMGHVLIIVQCFISSMANIYNEKILKEGNQLTESIFIQNSKLYFFGI
LFNGLTLGLQRSNRDQIKNCGFFYGHSAFSVALIFVTAFQGLSVAFILKFLDNMFHVL
MAQVTTVIITTVSVLVFDFRPSLEFFLEAPSVLLSIFIYNASKPQVPEYAPRQERIRD
LSGNLWERSSGDGEELERLTKPKSDESDEDTF"
BASE COUNT 860 a 564 c 567 g 967 t
ORIGIN
1 gaacgtgcct gcgcaatggg tgtcgggtcc gctttttccc aatccggacg taatcgtggt
61 ttttgttctg caataggcgg cttagaggga ggggcttttt cgcctatacc tactgtagct
121 tctccacgta tggaccctaa aggctactgc tgctactacg gggctagaca gttactgtct
181 cagctctagg atgtgcgttc ttccactaga agctcttctg agggaggtaa ttaaaaaaca
241 gtggaatgga aaaacagtgc tgtagtcatc ctgtaatatg ctccttgtca acaatgtata
301 cattcctgct aggtgccata ttcattgctt taagctcaag tcgcatctta ctagtgaagt
361 attctgccaa tgaagaaaac aagtatgatt atcttccaac tactgtgaat gtgtgctcag
421 aactggtgaa gctagttttc tgtgtgcttg tgtcattctg tgttataaag aaagatcatc
481 aaagtagaaa tttgaaatat gcttcctgga aggaattctc tgatttcatg aagtggtcca
541 ttcctgcctt tctttatttc ctggataact tgattgtctt ctatgtcctg tcctatcttc
601 aaccagccat ggctgttatc ttctcaaatt ttagcattat aacaacagct cttctattca
661 ggatagtgct gaagaggcgt ctaaactgga tccagtgggc ttccctcctg actttatttt
721 tgtctattgt ggccttgact gccgggacta aaactttaca gcacaacttg gcaggacgtg
781 gatttcatca cgatgccttt ttcagccctt ccaattcctg ccttcttttc agaagtgagt
841 gtcccagaaa agacaattgt acagcaaagg aatggacttt tcctgaagct aaatggaaca
901 ccacagccag agttttcagt cacatccgtc ttggcatggg ccatgttctt attatagtcc
961 agtgttttat ttcttcaatg gctaatatct ataatgaaaa gatactgaag gaggggaacc
1021 agctcactga aagcatcttc atacagaaca gcaaactcta tttctttggc attctgttta
1081 atgggctgac tctgggcctt cagaggagta accgtgatca gattaagaac tgtggatttt
1141 tttatggcca cagtgcattt tcagtagccc ttatttttgt aactgcattc cagggccttt
1201 cagtggcttt cattctgaag ttcctggata acatgttcca tgtcttgatg gcccaggtta
1261 ccactgtcat tatcacaaca gtgtctgtcc tggtctttga cttcaggccc tccctggaat
1321 ttttcttgga agccccatca gtccttctct ctatatttat ttataatgcc agcaagcctc
1381 aagttccgga atacgcacct aggcaagaaa ggatccgaga tctaagtggc aatctttggg
1441 agcgttccag tggggatgga gaagaactag aaagacttac caaacccaag agtgatgagt
1501 cagatgaaga tactttctaa ctggtaccca catagtttgc agctctcttg aaccttattt
1561 tcacattttc agtgtttgta atatttatct tttcactttg ataaaccaga aatgtttcta
1621 aatcctaata ttctttgcat atatctagct actccctaaa tggttccatc caaggcttag
1681 agtacccaaa ggctaagaaa ttctaaagaa ctgatacagg agtaacaata tgaagaattc
1741 attaatatct cagtacttga taaatcagaa agttatatgt gcagattatt ttccttggcc
1801 ttcaagcttc caaaaaactt gtaataatca tgttagctat agcttgtata tacacataga
1861 gatcaatttg ccaaatattc acaatcatgt agttctagtt tacatgccaa agtcttccct
1921 ttttaacatt ataaaagcta ggttgtctct tgaattttga ggccctagag atagtcattt
1981 tgcaagtaaa gagcaacggg accctttcta aaaacgttgg ttgaaggacc taaatacctg
2041 gccataccat agatttggga tgatgtagtc tgtgctaaat attttgctga agaagcagtt
2101 tctcagacac aacatctcag aattttaatt tttagaaatt catgggaaat tggatttttg
2161 taataatctt ttgatgtttt aaacattggt tccctagtca ccatagttac cacttgtatt
2221 ttaagtcatt taaacaagcc acggtggggc ttttttctcc tcagtttgag gagaaaaatc
2281 ttgatgtcat tactcctgaa ttattacatt ttggagaata agagggcatt ttattttatt
2341 agttactaat tcaagctgtg actattgtat atctttccaa gagttgaaat gctggcttca
2401 gaatcatacc agattgtcag tgaagctgat gcctaggaac ttttaaaggg atcctttcaa
2461 aaggatcact tagcaaacac atgttgactt ttaactgatg tatgaatatt aatactctaa
2521 aaatagaaag accagtaata tataagtcac tttacagtgc tacttcacac ttaaaagtgc
2581 atggtatttt tcatggtatt ttgcatgcag ccagttaact ctcgtagata gagaagtcag
2641 gtgatagatg atattaaaaa ttagcaaaca aaagtgactt gctcagggtc atgcagctgg
2701 gtgatgatag aagagtgggc tttaactggc aggcctgtat gtttacagac taccatactg
2761 taaatatgag ctttatggtg tcattctcag aaacttatac atttctgctc tcctttctcc
2821 taagtttcat gcagatgaat ataaggtaat atactattat ataattcatt tgtgatatcc
2881 acaataatat gactggcaag aattggtgga aatttgtaat taaaataatt attaaaccta
2941 aaaaaaaaaa aaaaaaaa
//