LOCUS BC010282 2239 bp mRNA linear HUM 16-SEP-2003
DEFINITION Homo sapiens leucine-rich PPR-motif containing, mRNA (cDNA clone
IMAGE:3048591), partial cds.
ACCESSION BC010282
VERSION BC010282.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2239)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2239)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: j Column: 19.
FEATURES Location/Qualifiers
source 1..2239
/db_xref="H-InvDB:HIT000087464"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3048591"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2239
/gene="LRPPRC"
/gene_synonym="CLONE-23970"
/gene_synonym="GP130"
/gene_synonym="LRP130"
/gene_synonym="LSFC"
/db_xref="GeneID:10128"
/db_xref="MIM:607544"
CDS <1..2110
/gene="LRPPRC"
/gene_synonym="CLONE-23970"
/gene_synonym="GP130"
/gene_synonym="LRP130"
/gene_synonym="LSFC"
/codon_start=2
/product="LRPPRC protein"
/protein_id="AAH10282.1"
/db_xref="GeneID:10128"
/db_xref="MIM:607544"
/translation="ENMQKALELKAKYESDMVTGGYAALINLCCRHDKVEDALNLKEE
FDRLDSSAVLDTGKYVGLVRVLAKHGKLQDAINILKEMKEKDVLIKDTTALSFFHMLN
GAALRGEIETVKQLHEAIVTLGLAEPSTNISFPLVTVHLEKGDLSTALEVAIDCYEKY
KVLPRIHDVLCKLVEKGETDLIQKAMDFVSQEQGEMVMLYDLFFAFLQTGNYKEAKKI
IETPGIRARSARLQWFCDRCVANNQVETLEKLVELTQKLFECDRDQMYYNLLKLYKIN
GDWQRADAVWNKIQEENVIPREKTLRLLAEILREGNQEVPFDVPELWYEDEKHSLNSS
SASTTEPDFQKDILIACRLNQKKGAYDIFLNAKEQNIVFNAETYSNLIKLLMSEDYFT
QAMEVKAFAETHIKGFTLNDAANSRLIITQVRRDYLKEAVTTLKTVLDQQQTPSRLAV
TRVIQALAMKGDVENIEVVQKMLNGLEDSIGLSKMVFINNIALAQIKNNNIDAAIENI
ENMLTSENKVIEPQYFGLAYLFRKVIEEQLEPAVEKISIMAERLANQFAIYKPVTDFF
LQLVDAGKVDDARALLQRCGAIAEQTPILLLFLLRNSRKQGKASTVKSVLELIPELNE
KEEAYNSLMKSYVSEKDVTSAKALYEHLTAKNTKLDDLFLKRYASLLKYAGEPVPFIE
PPESFEFYAQQLRKLRENSS"
BASE COUNT 767 a 394 c 479 g 599 t
ORIGIN
1 agagaatatg caaaaagccc ttgaattgaa agcaaaatat gaatccgaca tggttactgg
61 tggctatgca gctttaataa atttatgctg tcgacatgat aaagtagaag atgccttgaa
121 cttgaaagaa gaatttgacc gcttagattc atctgctgtc cttgacaccg gcaagtatgt
181 aggccttgta agagtattgg caaagcatgg caagctccaa gatgctatta acattctgaa
241 ggagatgaaa gagaaggatg ttcttatcaa agatacaaca gccttgtcct ttttccacat
301 gctaaatggc gcagctttaa gaggtgaaat tgaaacagta aaacagttgc atgaagccat
361 cgtgactcta gggttagcag aaccatccac caacataagt ttcccattgg tcactgtaca
421 cttggaaaag ggcgacctat ctactgctct tgaggtcgcc attgactgct atgaaaagta
481 taaagtatta ccaaggattc atgatgtctt gtgtaaactg gtagagaaag gcgagactga
541 tctaattcag aaagcaatgg actttgtgag ccaagaacaa ggtgaaatgg tgatgctcta
601 tgatctcttc tttgccttcc tacaaacagg aaattacaaa gaggccaaga agatcattga
661 gactccaggg attagagctc gatctgcaag gcttcagtgg ttttgtgaca gatgtgttgc
721 aaataatcag gttgaaactc tggaaaaatt agtggagctg acacagaagc tatttgaatg
781 tgatagagac cagatgtact acaatctgct aaaactgtat aaaataaacg gtgactggca
841 aagagctgat gcagtctgga ataaaatcca agaagaaaat gttattcctc gtgaaaagac
901 attaagatta ttagcagaaa tccttagaga gggtaaccag gaagttccgt ttgacgtacc
961 tgagttgtgg tatgaagatg aaaaacattc cctgaattct tcgtcagcct caaccacaga
1021 acctgatttc cagaaagata tattgattgc ctgccgattg aaccaaaaaa aaggggcata
1081 tgatattttc ctgaatgcaa aagagcaaaa cattgtgttt aatgctgaaa cctacagcaa
1141 tctcattaaa ttactgatgt cagaagatta ttttacacaa gcaatggaag tgaaagcatt
1201 cgcggagacc cacatcaagg gcttcacact gaacgatgct gccaacagcc gcctcatcat
1261 aacgcaagtt aggcgggatt atttgaaaga ggctgtgaca acactgaaaa cagtattgga
1321 tcagcagcag accccttcta ggttagcagt gacccgtgtc atccaggcat tggccatgaa
1381 gggtgatgtt gaaaacatag aagtagttca gaagatgtta aatggactcg aagactccat
1441 tggactttca aaaatggttt tcatcaataa cattgctttg gctcaaataa agaataataa
1501 catagatgcc gcaatagaaa acattgaaaa tatgcttact tcagagaata aagtcattga
1561 accccaatac ttcggcttgg catacttatt cagaaaagta atagaggagc agttggaacc
1621 agcagttgaa aagataagca tcatggcgga gagattggcc aatcagtttg caatttataa
1681 acctgtcact gattttttcc ttcaacttgt ggatgcaggc aaggtggatg atgccagagc
1741 tctcctacag agatgtggtg caattgctga acaaaccccg attttgttgt tgttcctcct
1801 taggaattct aggaaacaag gaaaggcatc aactgtgaaa tctgtgttag aattgattcc
1861 tgaattaaat gaaaaggaag aagcatacaa ttccctcatg aaaagctatg tctcagagaa
1921 agatgtcaca tctgctaaag cactgtatga acatttgact gcaaagaata caaaattgga
1981 tgatctgttt ctaaagcgtt acgcatcttt gctgaagtat gctggagagc ctgtcccttt
2041 cattgaaccc cctgaaagct ttgaatttta tgcacagcag ctaagaaaat tgagggaaaa
2101 ctcttcttga aataaccagg cgatactttg ttttgtatat atttgtgatt ctgtgtctac
2161 atgttatttt gaagtatatc tgagggaaaa ataaatgaaa attttcttta tgtacttaaa
2221 aaaaaaaaaa aaaaaaaaa
//