LOCUS BC010228 2438 bp mRNA linear HUM 27-MAY-2005
DEFINITION Homo sapiens chromosome 1 open reading frame 71, mRNA (cDNA clone
MGC:18089 IMAGE:4151228), complete cds.
ACCESSION BC010228
VERSION BC010228.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2438)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2438)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC010228.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: o Column: 16.
FEATURES Location/Qualifiers
source 1..2438
/db_xref="H-InvDB:HIT000050541"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:18089 IMAGE:4151228"
/tissue_type="Brain, glioblastoma with EGFR amplification"
/clone_lib="NCI_CGAP_Brn64"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2438
/gene="C1orf71"
/gene_synonym="FLJ32001"
/db_xref="GeneID:163882"
CDS 381..2231
/gene="C1orf71"
/gene_synonym="FLJ32001"
/codon_start=1
/product="C1orf71 protein"
/protein_id="AAH10228.1"
/db_xref="GeneID:163882"
/translation="MDDSDTPTYYLQIEPQDGCHPGDSVERSVTCLPSASDENENQLD
GDGHEHLTSSDSAMGKPQVSEQDSLNNNESCTLSCEVAAGENSQNTLCEASRDEQAFL
GKDKKIPGKRSPRSKKGTAKKIPPGLFSGDIAPLMQEKVLSAVTYAVDDEEAAEVNAN
EQPEAPKLVLQSLFSLIRGEVEQLDSRALPLCLHQIAESYFQEEDYEKAMKFIQLERL
YHEQLLANLSAIQEQWETKWKTVQPHTVTALRNSEKGFNGEDFERLTKICATHQDPLL
SKHKIAAVEKSQERKCSTQLLVSEDPKEGGATTKESESKTCLGTESSKESQHTVEPLG
SSPCCHQMDVQTDSPSLSVTAGKDHMEELLCSAEATLALHTQSSETAGSPSGPDSSED
ACEDDSRLQLAQTEACQDVARIEGIAEDPKVFLSSKSKTEPLISPGCDRIPPALISEG
KYSQAQRKELRLPLRDASEALPTDQLENNELNELQQPDLTDSDGKSPQAQADSDGSEN
VLCGNNQISDLGILLPEVCMAPEEKGDKDDQLNKETEDYLNSLLEGCLKDTEDSLSYE
DNQDDDSDLLQDLSPEEASYSLQENLPSDESCLSLDDLAKRIEIAEVNQR"
BASE COUNT 733 a 549 c 613 g 543 t
ORIGIN
1 cgcgggccgc cagcctccag ccggccagcc gcgaggggtg cgcagaggga ggcggggcgg
61 aaaggcgaga ggtgtctcct ccaccggagc caggggagac ccgagcaagc tccgtgacag
121 cacgtcggcc gccatgtcgc cgagtggggc tggaaacaga cccggcgccc agcggtagcc
181 ctccttgcgc ctccgattcc caggtgagga gaggaggagc gggatgcagg ggacccgccg
241 gctcgcggcc gggatggaaa gcctttcgga agcctctcgc tcctccccct gcgctgtcct
301 cctccagccg cgcagcctct gccctcccga catggaaggt ctttaatgta actttaaatg
361 gttcaccaaa ggatgctcta atggatgaca gcgatactcc tacatattat ctgcaaatag
421 aaccacaaga tggatgtcat cctggtgaca gcgtggaaag gagtgtgacc tgtctgcctt
481 ctgcatcaga tgaaaatgaa aatcagcttg acggggacgg gcatgagcat ctgaccagca
541 gtgacagtgc gatgggaaag ccccaagtgt ctgagcagga cagtctcaat aataatgaaa
601 gctgcacatt gagctgcgag gtggctgcag gtgagaactc gcaaaacacc ctttgtgaag
661 cctccagaga tgaacaggcc ttcttgggaa aggacaaaaa aattcctgga aaaagaagtc
721 caagaagcaa aaaagggact gctaagaaga taccaccagg acttttttca ggagatattg
781 cacctttaat gcaagaaaaa gtactaagcg cagtcacata tgctgttgat gatgaagaag
841 ctgctgaagt aaatgctaat gagcagccag aggcgccaaa gcttgttctg cagtctctgt
901 tttcacttat acgaggtgaa gttgagcagt tggattcaag agcacttccc ctttgccttc
961 atcagatagc agaatcctat ttccaggagg aggactatga gaaagcaatg aaattcattc
1021 agctagaacg attgtatcat gagcaattgc tcgcaaatct ttctgccatt caagaacagt
1081 gggaaacaaa atggaaaact gtgcaaccac atacagttac ggctctaagg aattcagaaa
1141 agggatttaa tggtgaagat tttgaacggc ttacgaaaat ttgtgcaaca catcaagatc
1201 ctcttttatc caaacataag atagcagctg tggagaagtc ccaggaaagg aaatgctcca
1261 cgcagttact agtgtctgaa gatccaaagg aaggaggagc taccaccaaa gagtcagaga
1321 gtaaaacttg tctcggcaca gagtcaagta aagaaagcca acatacagtg gagcccctgg
1381 ggagcagtcc ctgctgtcat cagatggacg tgcaaacaga ttccccaagc ctttcggtaa
1441 ctgcaggaaa ggaccacatg gaggagctgc tctgcagcgc tgaagccacg ttagcgctcc
1501 acacccagtc ctccgagaca gcagggagcc cgtctgggcc agactcttct gaggatgctt
1561 gtgaggatga cagtcgcttg cagctggctc aaacagaggc ctgccaggat gtggccagaa
1621 tagagggcat tgctgaagac cctaaggtgt ttctttccag caagtcaaag acagagccgt
1681 tgatttcacc aggctgtgac cgtatacctc ctgcattgat ttctgagggt aaatattcac
1741 aggctcagag gaaagaactc cgtttgccac ttcgggatgc ttctgaggcg ttgcccacag
1801 accaacttga gaacaatgaa ttaaatgagc tgcagcagcc tgatcttaca gacagtgatg
1861 gaaaatcacc acaggcgcag gctgactcag acggttctga gaatgtgctc tgtggaaata
1921 atcaaatatc tgacttaggc atactgcttc cagaggtgtg tatggcccca gaggaaaagg
1981 gagataaaga cgaccaactc aacaaagaaa cagaagacta tttgaacagc cttttagaag
2041 gatgtttaaa agatactgaa gattcccttt cctatgaaga taaccaagac gacgactccg
2101 atctccttca agatctctct cctgaagaag catcctatag tctccaggag aatctgcctt
2161 ctgatgagag ctgtctttct cttgatgatc ttgccaaaag gatagagatt gcagaggtaa
2221 atcagagatg aagtacaatt aaaagtaaaa tggcatttaa aaaacatata tatgtattaa
2281 atattgcctt gtttttgtaa gttttccctt gtctcaaaca tgagggaaaa ttctagttaa
2341 cgtaagcttt taattattag tagtttttac atttgtatgt attgaataaa atgactttta
2401 atcattgcaa tgttcatact aaaaaaaaaa aaaaaaaa
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