LOCUS BC010166 889 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens transmembrane 4 L six family member 1, mRNA (cDNA
clone MGC:19591 IMAGE:4040623), complete cds.
ACCESSION BC010166
VERSION BC010166.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 889)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 889)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC010166.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: l Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62422580.
FEATURES Location/Qualifiers
source 1..889
/db_xref="H-InvDB:HIT000034850"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19591 IMAGE:4040623"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_18"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..889
/gene="TM4SF1"
/gene_synonym="H-L6"
/gene_synonym="L6"
/gene_synonym="TAAL6"
/db_xref="GeneID:4071"
/db_xref="HGNC:HGNC:11853"
/db_xref="MIM:191155"
CDS 51..659
/gene="TM4SF1"
/gene_synonym="H-L6"
/gene_synonym="L6"
/gene_synonym="TAAL6"
/codon_start=1
/product="transmembrane 4 L six family member 1"
/protein_id="AAH10166.1"
/db_xref="GeneID:4071"
/db_xref="HGNC:HGNC:11853"
/db_xref="MIM:191155"
/translation="MCYGKCARCIGHSLVGLALLCIAANILLYFPNGETKYASENHLS
RFVWFFSGIVGGGLLMLLPAFVFIGLEQDDCCGCCGHENCGKRCAMLSSVLAALIGIA
GSGYCVIVAALGLAEGPLCLDSLGQWNYTFASTEGQYLLDTSTWSECTEPKHIVEWNV
SLFSILLALGGIEFILCLIQVINGVLGGICGFCCSHQQQYDC"
BASE COUNT 236 a 196 c 196 g 261 t
ORIGIN
1 atcactgagc tgaagacaaa gagaaggggg agaaaaccta gcagaccacc atgtgctatg
61 ggaagtgtgc acgatgcatc ggacattctc tggtggggct cgccctcctg tgcatcgcgg
121 ctaatatttt gctttacttt cccaatgggg aaacaaagta tgcctccgaa aaccacctca
181 gccgcttcgt gtggttcttt tctggcatcg taggaggtgg cctgctgatg ctcctgccag
241 catttgtctt cattgggctg gaacaggatg actgctgtgg ctgctgtggc catgaaaact
301 gtggcaaacg atgtgcgatg ctttcttctg tattggctgc tctcattgga attgcaggat
361 ctggctactg tgtcattgtg gcagcccttg gcttagcaga aggaccacta tgtcttgatt
421 ccctcggcca gtggaactac acctttgcca gcaccgaggg ccagtacctt ctggatacct
481 ccacatggtc cgagtgcact gaacccaagc acattgtgga atggaatgta tctctgtttt
541 ctatcctctt ggctcttggt ggaattgaat tcatcttgtg tcttattcaa gtaataaatg
601 gagtgcttgg aggcatatgt ggcttttgct gctctcacca acagcaatat gactgctaaa
661 agaaccaacc caggacagag ccacaatctt cctctatttc attgtaattt atatatttca
721 cttgtattca tttgtaaaac tttgtattag tgtaacatac tccccacagt ctacttttac
781 aaacgcctgt aaagactggc atcttcacag gatgtcagtg tttaaattta gtaaacttct
841 tttttgtttg tttaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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