LOCUS BC010145 874 bp mRNA linear HUM 16-AUG-2008
DEFINITION Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 4, mRNA
(cDNA clone IMAGE:4309314), complete cds.
ACCESSION BC010145
VERSION BC010145.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 874)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 874)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC010145.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: o Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5031770
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..874
/db_xref="H-InvDB:HIT000034833"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4309314"
/tissue_type="Primary B-Cells from Tonsils"
/clone_lib="NIH_MGC_48"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..874
/gene="DNAJC4"
/gene_synonym="DANJC4"
/gene_synonym="MCG18"
/db_xref="GeneID:3338"
/db_xref="HGNC:HGNC:5271"
/db_xref="MIM:604189"
CDS 289..492
/gene="DNAJC4"
/gene_synonym="DANJC4"
/gene_synonym="MCG18"
/codon_start=1
/product="DNAJC4 protein"
/protein_id="AAH10145.1"
/db_xref="GeneID:3338"
/db_xref="HGNC:HGNC:5271"
/db_xref="MIM:604189"
/translation="MPPLLPLRLCRLWPRNPPSRLLGAAAGQRSRPSTYYELLGVHPG
ASTEEVKRAFFSKSKEEGEADAP"
BASE COUNT 167 a 304 c 248 g 155 t
ORIGIN
1 aagttccctg ggtgggaacg gggtcttggg gtccctggct gggtggccag accccgaagc
61 cagcgctggg aagggctgcg gatgcccggg tcagaggaag gggcaggtcc aaggacacgc
121 gggtctggtc ctgggcaaga accgccccct ctccgggcct gcttcagtct tcctttgcag
181 aacaacgggc caggcccctt ccctctgccc ccgggtgctt gaagtctagc cccatcctgg
241 tccaatgcgc tcttggtagc ctcctttccc agctgcccgc ccgccgccat gccgccctta
301 ctgcccctgc gcctgtgccg gctgtggccc cgcaaccctc cctcccggct cctcggagcg
361 gccgccgggc agcggtccag acccagtact tattatgaac tgttgggggt gcatcctggt
421 gccagcactg aggaagttaa acgagctttc ttctccaagt ccaaagagga aggtgaagca
481 gatgcacctt aacttcatgg atgaaaagga tcggatcatc acagccttct acaacgaagc
541 ccgggcacgg gccaggtctg tccctgctct attctgctcc ctgctccctg tccaggaacc
601 acacttcggg atccctatcc caaccaccca ggtgccctct cctccagggc caacagaggc
661 atccttcagc aggagcgaca acggctaggg cagcggcagc cgccaccatc cgagccaacc
721 caaggccccg agatcgtgcc ccggggcgcc ggcccctgag gggctcacct ggatggggcc
781 tgcagtgcgt tcccgctttg cttccttccc tggacggccc gctccccgaa acgcgcgcaa
841 taaagtgatt cgcagaaaaa aaaaaaaaaa aaaa
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