LOCUS BC010140 2185 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens tumor necrosis factor receptor superfamily, member 1A, mRNA (cDNA clone MGC:19588 IMAGE:4131360), complete cds. ACCESSION BC010140 VERSION BC010140.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2185) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2185) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 20, 2003 this sequence version replaced BC010140.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 27 Row: m Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 23312372. FEATURES Location/Qualifiers source 1..2185 /db_xref="H-InvDB:HIT000034828" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:19588 IMAGE:4131360" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2185 /gene="TNFRSF1A" /gene_synonym="CD120a" /gene_synonym="FPF" /gene_synonym="MGC19588" /gene_synonym="p55" /gene_synonym="p55-R" /gene_synonym="p60" /gene_synonym="TBP1" /gene_synonym="TNF-R" /gene_synonym="TNF-R-I" /gene_synonym="TNF-R55" /gene_synonym="TNFAR" /gene_synonym="TNFR55" /gene_synonym="TNFR60" /db_xref="GeneID:7132" /db_xref="HGNC:HGNC:11916" /db_xref="MIM:191190" CDS 232..1599 /gene="TNFRSF1A" /gene_synonym="CD120a" /gene_synonym="FPF" /gene_synonym="MGC19588" /gene_synonym="p55" /gene_synonym="p55-R" /gene_synonym="p60" /gene_synonym="TBP1" /gene_synonym="TNF-R" /gene_synonym="TNF-R-I" /gene_synonym="TNF-R55" /gene_synonym="TNFAR" /gene_synonym="TNFR55" /gene_synonym="TNFR60" /codon_start=1 /product="tumor necrosis factor receptor superfamily, member 1A" /protein_id="AAH10140.1" /db_xref="GeneID:7132" /db_xref="HGNC:HGNC:11916" /db_xref="MIM:191190" /translation="MGLSTVPDLLLPLVLLELLVGIYPSGVIGLVPHLGDREKRDSVC PQGKYIHPQNNSICCTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSC SKCRKEMGQVEISSCTVDRDTVCGCRKNQYRHYWSENLFQCFNCSLCLNGTVHLSCQE KQNTVCTCHAGFFLRENECVSCSNCKKSLECTKLCLPQIENVKGTEDSGTTVLLPLVI FFGLCLLSLLFIGLMYRYQRWKSKLYSIVCGKSTPEKEGELEGTTTKPLAPNPSFSPT PGFTPTLGFSPVPSSTFTSSSTYTPGDCPNFAAPRREVAPPYQGADPILATALASDPI PNPLQKWEDSAHKPQSLDTDDPATLYAVVENVPPLRWKEFVRRLGLSDHEIDRLELQN GRCLREAQYSMLATWRRRTPRREATLELLGRVLRDMDLLGCLEDIEEALCGPAALPPA PSLLR" BASE COUNT 476 a 642 c 595 g 472 t ORIGIN 1 ctctgcttta attttctcag aattctctgg actgaggctc cagttctggc ctttggggtt 61 caagatcact gggaccaggc cgtgatctct atgcccgagt ctcaaccctc aactgtcacc 121 ccaaggcact tgggacgtcc tggacagacc gagtcccggg aagccccagc actgccgctg 181 ccacactgcc ctgagcccaa atgggggagt gagaggccat agctgtctgg catgggcctc 241 tccaccgtgc ctgacctgct gctgccactg gtgctcctgg agctgttggt gggaatatac 301 ccctcagggg ttattggact ggtccctcac ctaggggaca gggagaagag agatagtgtg 361 tgtccccaag gaaaatatat ccaccctcaa aataattcga tttgctgtac caagtgccac 421 aaaggaacct acttgtacaa tgactgtcca ggcccggggc aggatacgga ctgcagggag 481 tgtgagagcg gctccttcac cgcttcagaa aaccacctca gacactgcct cagctgctcc 541 aaatgccgaa aggaaatggg tcaggtggag atctcttctt gcacagtgga ccgggacacc 601 gtgtgtggct gcaggaagaa ccagtaccgg cattattgga gtgaaaacct tttccagtgc 661 ttcaattgca gcctctgcct caatgggacc gtgcacctct cctgccagga gaaacagaac 721 accgtgtgca cctgccatgc aggtttcttt ctaagagaaa acgagtgtgt ctcctgtagt 781 aactgtaaga aaagcctgga gtgcacgaag ttgtgcctac cccagattga gaatgttaag 841 ggcactgagg actcaggcac cacagtgctg ttgcccctgg tcattttctt tggtctttgc 901 cttttatccc tcctcttcat tggtttaatg tatcgctacc aacggtggaa gtccaagctc 961 tactccattg tttgtgggaa atcgacacct gaaaaagagg gggagcttga aggaactact 1021 actaagcccc tggccccaaa cccaagcttc agtcccactc caggcttcac ccccaccctg 1081 ggcttcagtc ccgtgcccag ttccaccttc acctccagct ccacctatac ccccggtgac 1141 tgtcccaact ttgcggctcc ccgcagagag gtggcaccac cctatcaggg ggctgacccc 1201 atccttgcga cagccctcgc ctccgacccc atccccaacc cccttcagaa gtgggaggac 1261 agcgcccaca agccacagag cctagacact gatgaccccg cgacgctgta cgccgtggtg 1321 gagaacgtgc ccccgttgcg ctggaaggaa ttcgtgcggc gcctagggct gagcgaccac 1381 gagatcgatc ggctggagct gcagaacggg cgctgcctgc gcgaggcgca atacagcatg 1441 ctggcgacct ggaggcggcg cacgccgcgg cgcgaggcca cgctggagct gctgggacgc 1501 gtgctccgcg acatggacct gctgggctgc ctggaggaca tcgaggaggc gctttgcggc 1561 cccgccgccc tcccgcccgc gcccagtctt ctcagatgag gctgcgcccc tgcgggcagc 1621 tctaaggacc gtcctgcgag atcgccttcc aaccccactt ttttctggaa aggaggggtc 1681 ctgcaggggc aagcaggagc tagcagccgc ctacttggtg ctaacccctc gatgtacata 1741 gcttttctca gctgcctgcg cgccgccgac agtcagcgct gtgcgcgcgg agagaggtgc 1801 gccgtgggct caagagcctg agtgggtggt ttgcgaggat gagggacgct atgcctcatg 1861 cccgttttgg gtgtcctcac cagcaaggct gctcgggggc ccctggttcg tccctgagcc 1921 tttttcacag tgcataagca gttttttttg tttttgtttt gttttgtttg tttttaaatc 1981 aatcatgtta cactaataga aacttggcac tcctgtgccc tctgcctgga caagcacata 2041 gcaagctgaa ctgtcctaag gcaggggcga gcacggaaca atggggcctt cagctggagc 2101 tgtggacttt tgtacataca ctaaaattct gaagttaaag ctctgctctt ggaaaaaaaa 2161 aaaaaaaaaa aaaaaaaaaa aaaaa //