LOCUS BC010132 2756 bp mRNA linear HUM 08-OCT-2003 DEFINITION Homo sapiens KH domain containing, RNA binding, signal transduction associated 1, mRNA (cDNA clone MGC:19537 IMAGE:3956853), complete cds. ACCESSION BC010132 VERSION BC010132.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2756) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2756) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC010132.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 27 Row: k Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 5730026. FEATURES Location/Qualifiers source 1..2756 /db_xref="H-InvDB:HIT000050533" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:19537 IMAGE:3956853" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_21" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2756 /gene="KHDRBS1" /gene_synonym="p62" /gene_synonym="Sam68" /db_xref="GeneID:10657" /db_xref="MIM:602489" CDS 71..1216 /gene="KHDRBS1" /gene_synonym="p62" /gene_synonym="Sam68" /codon_start=1 /product="KHDRBS1 protein" /protein_id="AAH10132.1" /db_xref="GeneID:10657" /db_xref="MIM:602489" /translation="MQRRDDPAARMSRSSGRSGSMDPSGAHPSVRQTPSRQPPLPHRS RGGGGGSRGGARASPATQPPPLLPPSATGPDATVGGPAPTPLLPPSATASVKMEPENK YLPELMAEKDSLDPSFTHAMQLLTAEIEKIQKGDSKKDDEENYLDLFSHKNMKLKERV LIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVPDMMDDICQEQFLELSYLNG VPEPSRGRGVPVRGRGAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVP PPPTVRGAPAPRARTAGIQRIPLPPPPAPETYEEYVRNLNNVPFPST" misc_feature 533..895 /gene="KHDRBS1" /gene_synonym="p62" /gene_synonym="Sam68" /note="MSL5; Region: COG5176, MSL5, Splicing factor (branch point binding protein) [RNA processing and modification]" /db_xref="CDD:COG5176" BASE COUNT 787 a 608 c 662 g 699 t ORIGIN 1 gccaaccgcc gctcgggcct ccgtcgctgc cgcgtcgctt tctcgctcct tggatcgcac 61 atcctcccag atgcagcgcc gggacgaccc cgccgcgcgc atgagccggt cttcgggccg 121 tagcggctcc atggacccct ccggtgccca cccctcggtg cgtcagacgc cgtctcggca 181 gccgccgctg cctcaccggt cccggggagg cggaggggga tcccgcgggg gcgcccgggc 241 ctcgcccgcc acgcagccgc caccgctgct gccgccctcg gccacgggtc ccgacgcgac 301 agtgggcggg ccagcgccga ccccgctgct gcccccctcg gccacagcct cggtcaagat 361 ggagccagag aacaagtacc tgcccgaact catggccgag aaggactcgc tcgacccgtc 421 cttcactcac gccatgcagc tgctgacggc agaaattgag aagattcaga aaggagactc 481 aaaaaaggat gatgaggaga attacttgga tttattttct cataagaaca tgaaactgaa 541 agagcgagtg ctgatacctg tcaagcagta tcccaagttc aattttgtgg ggaagattct 601 tggaccacaa gggaatacaa tcaaaagact gcaggaagag actggtgcaa agatctctgt 661 attgggaaag ggctcaatga gagacaaagc caaggaggaa gagctgcgca aaggtggaga 721 ccccaaatat gcccacttga atatggatct gcatgtcttc attgaagtct ttggaccccc 781 atgtgaggct tatgctctta tggcccatgc catggaggaa gtcaagaaat ttctagtacc 841 ggatatgatg gatgatatct gtcaggagca atttctagag ctgtcctact tgaatggagt 901 acctgaaccc tctcgtggac gtggggtgcc agtgagaggc cggggagctg cacctcctcc 961 accacctgtt cccaggggcc gtggtgttgg accacctcgg ggggctttgg tacgtggtac 1021 accagtaagg ggagccatca ccagaggtgc cactgtgact cgaggcgtgc cacccccacc 1081 tactgtgagg ggtgctccag caccaagagc acggacagcg ggcatccaga ggataccttt 1141 gcctccacct cctgcaccag aaacatatga agaatatgta agaaatttga acaatgtgcc 1201 atttcccagt acctagaagg ctgctaaagg aagttgaatg acagggcctc ggtcctttat 1261 ggatatgatg atacatacgc agaacaaagt tacgaaggct acgaaggcta ttacagccag 1321 agtcaagggg actcagaata ttatgactat ggacatgggg aggttcaaga ttcttatgaa 1381 gcttatggcc aggacgactg gaatgggacc aggccgtcgc tgaaggcccc tcctgctagg 1441 ccagtgaagg gagcatacag agagcaccca tatggacgtt attaaaaaca aacatgaggg 1501 gaaaatatca gttatgagca aagttgttac tgatttcttg tatctcccag gattcctgtt 1561 gctttaccca caacagacaa gtaattgtct aagtgttttt cttcgtggtc cccttcttct 1621 ccccacctta ttccattctt aactctgcat tctggcttct gtatgtagta ttttaaaatg 1681 agttaaaata gatttaggaa tattgaatta attttttaag tgtgtagatg cttttttctt 1741 tgttgtttaa atataaacag aagtgtacct tttataataa aaaaaagaag ttgagtaaaa 1801 aaaaaaaaca cacaaacctg ttagtttcaa aaatgacatt gcttgcttaa aggttctgaa 1861 gtaaaggctt gttaagtttc tcttagtttt gatttgaggc atcccgtaaa gttgtagttg 1921 cagaatccca aactaggcta catttcaaaa ttcagggctg tttaagattt aaaatcacaa 1981 acattaacgg cagtaggcac caccatgtaa aagtgagctc agacgtctct aaaaaatgtt 2041 tcctttataa aagcacatgg cggttgaatc ttaaggttaa attttaatat gaaagatcct 2101 catgaattaa atagttgatg caatttttaa cgttaattga tataaaaaaa aaaacaacaa 2161 aattaggctt gtaaaactga ctttttcatt acgtgggttt tgaaatctag ccccagacat 2221 actgtgttga gagatactta gagggaggga gtaggttttg aagaggttga tggtggtggg 2281 gagggaaggc ctcctgaatt gagtttgatg cagagctttt tagccatgaa gaatctttca 2341 gtcatagtac taataattaa attttcagta tttaaaaaga caaagtattt tgtccatttg 2401 agattctgca ctccatgaaa agttcacttg gacgctgggg ccaaaagctg ttgattttct 2461 taagttgacg gttgtcaata tatcggactg ttcccaagtt agtcaagtat gtctcaacac 2521 tagcatgata taaaaaggga cactgcagct gaatgaaaaa ggaatcaaaa tccactttgt 2581 acataagtta aagtcctaat tggatttgta ccgtcctccc attttgttct cggaagatta 2641 aatgctacat gtgtaagtct gcctaaatag gtagcttaaa cttatgtcaa aatgtctgca 2701 gcagtttgtc aataaagttt agtccttttt taatcaaaaa aaaaaaaaaa aaaaaa //