LOCUS BC010050 2914 bp mRNA linear HUM 23-DEC-2003
DEFINITION Homo sapiens calmodulin binding transcription activator 2, mRNA
(cDNA clone IMAGE:3840178), partial cds.
ACCESSION BC010050
VERSION BC010050.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2914)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2914)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC010050.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: i Column: 11.
FEATURES Location/Qualifiers
source 1..2914
/db_xref="H-InvDB:HIT000087433"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3840178"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2914
/gene="CAMTA2"
/gene_synonym="KIAA0909"
/db_xref="GeneID:23125"
CDS <1..2138
/gene="CAMTA2"
/gene_synonym="KIAA0909"
/codon_start=3
/product="CAMTA2 protein"
/protein_id="AAH10050.2"
/db_xref="GeneID:23125"
/translation="GEALFGGPVGASELEPFSLSSFPDLMGELISDEAPSIPAPTPQL
SPALSTITDFSPEWSYPEGGVKVLITGPWTEAAEHYSCVFDHIAVPASLVQPGVLRCY
CPAHEVGLVSLQVAGREGPLSASVLFEYRARRFLSLPSTQLDWLSLDDNQFRMSILER
LEQMEKRMAEIAAAGQVPCQGPDAPPVQDEGQGPGFEARVVVLVESMIPRSTWKGPER
LAHGSPFRGMSLLHLAAAQGYARLIETLSQWRSVETGSLDLEQEVDPLNVDHFSCTPL
MWACALGHLEAAVLLFRWNRQALSIPDSLGRLPLSVAHSRGHVRLARCLEELQRQEPS
VEPPFALSPPSSSPDTGLSSVSSPSELSDGTFSVTSAYSSAPDGSPPPAPLPASEMTM
EDMAPGQLSSGVPEAPLLLMDYEATNSKGPLSSLPALPPASDDGAAPEDADSPQAVDV
IPVDMISLAKQIIEATPERIKREDFVGLPEAGASMRERTGAVGLSETMSWLASYLENV
DHFPSSTPPSELPFERGRLAVPSAPSWAEFLSASTSGKMESDFALLTLSDHEQRELYE
AARVIQTAFRKYKGRRLKEQQEVAAAVIQRCYRKYKQFALYKKMTQAAILIQSKFRSY
YEQKRFQQSRRAAVLIQQHYRSYRRRPGPPHRTSATLPARNKGSFLTKKQDQAARKIM
RFLRRCRHRMRELKQNQELEGLPQPGLAT"
misc_feature 150..395
/gene="CAMTA2"
/gene_synonym="KIAA0909"
/note="TIG; Region: IPT/TIG domain. This family consists
of a domain that has an immunoglobulin like fold. These
domains are found in cell surface receptors such as Met
and Ron as well as in intracellular transcription factors
where it is involved in DNA binding. CAUTION: This family
does not currently recognise a significant number of
members"
/db_xref="CDD:pfam01833"
misc_feature 681..977
/gene="CAMTA2"
/gene_synonym="KIAA0909"
/note="ANK; Region: ankyrin repeats"
/db_xref="CDD:cd00204"
BASE COUNT 535 a 954 c 803 g 622 t
ORIGIN
1 gaggagaggc cttgtttgga ggacctgttg gggccagtga actggagccc ttcagtcttt
61 catcattccc agaccttatg ggagaactca tcagtgacga agctccaagc atccctgctc
121 cgacccccca gctgtctcct gctcttagca ccatcacaga cttctcccca gagtggtcct
181 acccagaggg tggggtcaag gtgctcatca caggtccttg gaccgaagcc gccgagcatt
241 actcctgtgt ctttgatcac atcgcagtgc cagcctcact tgtccagcct ggtgtcttac
301 gctgctactg tcccgcccat gaggtagggc tggtgtcttt gcaggtggca gggcgggagg
361 ggcccctttc tgcttctgtg ctctttgagt atcgagcccg ccgattcctg tctctgccta
421 gtactcaact tgactggctg tcactggacg acaaccagtt ccggatgtcc atactagagc
481 gactggagca gatggagaag cggatggcag agatcgcagc agctgggcag gtgccttgcc
541 agggtcctga tgctcctcca gttcaggatg aaggccaggg gcctgggttc gaagcacggg
601 tagtggtctt ggtagaaagc atgatcccac gctccacctg gaagggtcct gaacgtctgg
661 cccatggaag ccccttccgg ggcatgagcc ttctgcacct ggctgctgcc cagggctatg
721 cccgcctcat cgagaccctg agccagtggc ggagtgtgga gactggaagc ttggacttag
781 agcaggaggt tgacccgctc aacgtggatc atttctcttg cacccctctg atgtgggctt
841 gtgccctggg acacctggaa gctgctgtgc tccttttccg ttggaaccga caggcactga
901 gcattcccga ctctctgggc cgtctgccat tgtctgtggc tcattcccgg ggtcatgtgc
961 gccttgcccg ctgccttgag gaactacaga gacaggagcc ttcggtggag cccccatttg
1021 ccctatcgcc accctcctcc agcccagaca ctggtctgag cagcgtctcc tcgccctcgg
1081 agctgtcgga tggcaccttt tccgtcacgt cagcctattc tagtgcccca gatggcagtc
1141 ccccccctgc acctctgcca gcctctgaga tgactatgga ggacatggcc ccaggccagc
1201 tttcctctgg tgtcccagaa gcccccctac tcctcatgga ctatgaggct accaactcca
1261 aggggcccct ctcctccctt cctgccctcc caccagcttc agatgatggg gctgctccgg
1321 aggacgctga cagcccacag gctgtggatg tgatcccggt ggacatgatc tcactagcca
1381 agcagatcat cgaagccaca ccggagcgga ttaaacgaga ggacttcgtg gggctgcccg
1441 aggctggagc ctcaatgcgg gagcggacag gggctgtggg gctcagtgag accatgtcct
1501 ggctggccag ctacctggag aatgtggacc atttccccag ctcaacccct cccagcgaac
1561 tgccctttga gcgaggtcgc ctggctgtcc cttcagcacc ctcctgggca gagtttctct
1621 ctgcatccac cagtggcaag atggaaagtg attttgccct gctgacacta tcagatcacg
1681 agcagcggga actgtatgag gctgcccgag tcatccagac ggccttccga aagtacaagg
1741 gccggcggct gaaggagcag caggaggtag cagcagctgt aatccagcgc tgttaccgga
1801 agtacaagca gtttgcactc tataagaaga tgacccaggc ggccatcctg atccagagca
1861 agttccgaag ctactatgaa cagaagcgat ttcagcagag ccgccgagcg gctgtgctca
1921 tccagcagca ctaccgctcc taccgccgca ggcccggccc tccccaccgg acttcggcca
1981 ccctgcctgc ccgcaacaaa ggctcctttc tcaccaagaa gcaggaccag gcagcccgga
2041 agatcatgag attcctgcgg cgctgccgac acaggatgag ggaactgaag cagaaccagg
2101 agctggaagg gcttccccag ccgggactgg ccacatgacc tggccaccgc ctttctcacc
2161 accctggggg cgcctcgtgc agtcttaaca gggagagggc tttctggggc agggggagcc
2221 cctgtcggca gctttcctgt tcacctttgt tggagccctc tgtaggcctc ctccctcctc
2281 cccacgcctt gctcccacac ccctctcctc gtccctcctg gtcgtgcccc gtctcttttg
2341 gtcctggctc cagaaaaccc gcgccccaca tacctgcatc ttccgctgtg acctccggag
2401 ccctgcctgc ccctgctccc cagctcctcc tgcctgcacc cgactcggcc ccctcctgac
2461 ttgccttatt tatttgttcg acgcgtctct gaatgtatcc gcctcggttc ccaccactgc
2521 cttcgctgcg cacgcccctc gtgtttcagg gctgaccgtg tccccacccg actccgcatg
2581 tttgcgtctg tttcctccct ctctggccct gtcttacccc atcacccgac tctggccact
2641 gacctcaggg ccgaagggga ggtggtgtac ataggaacgc gttgcggagt ccgccccgtc
2701 ccccgagggg aggggtcttg tacatactgt aacatacaga gtatagtgaa gaatctattt
2761 aaggcgccgc ggggagggct gcacggccgg gcttgtggtt ctctagcgcg gcgggggcct
2821 cctgccggct ccacgggcac tttctacttg tgcatgggct tggtttatac gaattgccat
2881 taaacatcgc tgcaccaaaa aaaaaaaaaa aaaa
//