LOCUS BC010032 2092 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens LAG1 homolog, ceramide synthase 2, mRNA (cDNA clone MGC:19692 IMAGE:3506408), complete cds. ACCESSION BC010032 VERSION BC010032.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2092) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2092) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Dec 19, 2003 this sequence version replaced BC010032.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 27 Row: c Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 32455257. FEATURES Location/Qualifiers source 1..2092 /db_xref="H-InvDB:HIT000034752" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:19692 IMAGE:3506408" /tissue_type="Kidney, renal cell adenocarcinoma" /clone_lib="NIH_MGC_14" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2092 /gene="LASS2" /gene_synonym="CerS2" /gene_synonym="L3" /gene_synonym="SP260" /gene_synonym="TMSG1" /db_xref="GeneID:29956" /db_xref="HGNC:HGNC:14076" /db_xref="MIM:606920" CDS 46..1188 /gene="LASS2" /gene_synonym="CerS2" /gene_synonym="L3" /gene_synonym="SP260" /gene_synonym="TMSG1" /codon_start=1 /product="LAG1 homolog, ceramide synthase 2" /protein_id="AAH10032.1" /db_xref="GeneID:29956" /db_xref="HGNC:HGNC:14076" /db_xref="MIM:606920" /translation="MLQTLYDYFWWERLWLPVNLTWADLEDRDGRVYAKASDLYITLP LALLFLIVRYFFELYVATPLAALLNIKEKTRLRAPPNATLEHFYLTSGKQPKQVEVEL LSRQSGLSGRQVERWFRRRRNQDRPSLLKKFREASWRFTFYLIAFIAGMAVIVDKPWF YDMKKVWEGYPIQSTIPSQYWYYMIELSFYWSLLFSIASDVKRKDFKEQIIHHVATII LISFSWFANYIRAGTLIMALHDSSDYLLESAKMFNYAGWKNTCNNIFIVFAIVFIITR LVILPFWILHCTLVYPLELYPAFFGYYFFNSMMGVLQLLHIFWAYLILRMAHKFITGK LVEDERSDREETESSEGEEAAAGGGAKSRPLANGHPILNNNHRKND" BASE COUNT 496 a 565 c 471 g 560 t ORIGIN 1 agtacacgga gcagcggccc cggccccgcc aacgctgccg ccgggatgct ccagaccttg 61 tatgattact tctggtggga acgtctgtgg ctgcctgtga acttgacctg ggccgatcta 121 gaagaccgag atggacgtgt ctacgccaaa gcctcagatc tctatatcac gctgcccctg 181 gccttgctct tcctcatcgt tcgatacttc tttgagctgt acgtggctac accactggct 241 gccctcttga acataaagga gaaaactcgg ctgcgggcac ctcccaacgc caccttggaa 301 catttctacc tgaccagtgg caagcagccc aagcaggtgg aagtagagct tttgtcccgg 361 cagagcgggc tctctggccg ccaggtagag cgttggttcc gtcgccgccg caaccaggac 421 cggcccagtc tcctcaagaa gttccgagaa gccagctgga gattcacatt ttacctgatt 481 gccttcattg ccggcatggc cgtcattgtg gataaaccct ggttctatga catgaagaaa 541 gtttgggagg gatatcccat acagagcact atcccttccc agtattggta ctacatgatt 601 gaactttcct tctactggtc cctgctcttc agcattgcct ctgatgtcaa gcgaaaggat 661 ttcaaggaac agatcatcca ccatgtggcc accatcattc tcatcagctt ttcttggttt 721 gccaattaca tccgagctgg gactctaatc atggctctgc atgactcttc cgattacctg 781 ctggagtcag ccaagatgtt taactacgcg ggatggaaga acacctgcaa caacatcttc 841 atcgtcttcg ccattgtttt tatcatcacc cgactggtca tcctgccctt ctggatcctg 901 cattgcaccc tggtgtaccc actggagctc tatcctgcct tctttggcta ttacttcttc 961 aattccatga tgggagttct acagctgctg catatcttct gggcctacct cattttgcgc 1021 atggcccaca agttcataac tggaaagctg gtagaagatg aacgcagtga ccgggaagaa 1081 acagagagct cagaggggga ggaggctgca gctgggggag gagcaaagag ccggccccta 1141 gccaatggcc accccatcct caataacaac catcgtaaga atgactgaac cattattcca 1201 gctgcctccc agattaatgc ataaagccaa ggaactaccc cgctccctgc gctatagggt 1261 cactttaagc tctgggaaaa aggagaaagt gagaggagag ttctctgcat cctccctcct 1321 tgcttgtcac ccagttgcct ttaaaccaaa ttctaaccag cctatcccca ggtaggggga 1381 cgttggttat attctgttag agggggacgg tcgtattttc ctccctaccc gccaagtcat 1441 cctttctact gcttttgagg ccctccctca gctctctgtg ggtaggggtt acaattcaca 1501 ttccttattc tgagaatttg gccccagctg tttgcctttg actccctgac ctccagagcc 1561 agggttgtgc cttattgtcc catctgtggg cctcattctg ccaaagctgg accaaggcta 1621 acctttctaa gctccctaac ttgggccaga aaccaaagct gagcttttaa ctttctccct 1681 ctatgacaca aatgaattga gggtaggagg agggtgcaca taacccttac cctacctctg 1741 ccaaaaagtg ggggctgtac tggggactgc tcggatgatc tttcttagtg ctacttcttt 1801 cagctgtccc tgtagcgaca ggtctaagat ctgactgcct cctcctttct ctggcctctt 1861 cccccttccc tcttctcttc agctaggcta gctggtttgg agtagaatgg caactaattc 1921 taatttttat ttattaaata tttggggttt tggttttaaa gccagaatta cggctagcac 1981 ctagcatttc agcagaggga ccattttaga ccaaaatgta ctgttaatgg gttttttttt 2041 aaaattaaaa gattaaataa aaaatattaa ataaaaaaaa aaaaaaaaaa aa //