LOCUS BC010027 3111 bp mRNA linear HUM 19-APR-2005
DEFINITION Homo sapiens GTPase activating protein and VPS9 domains 1, mRNA
(cDNA clone IMAGE:3355777).
ACCESSION BC010027
VERSION BC010027.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3111)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3111)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC010027.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: c Column: 5.
FEATURES Location/Qualifiers
source 1..3111
/db_xref="H-InvDB:HIT000087427"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3355777"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 912 a 673 c 732 g 794 t
ORIGIN
1 caaagtgatc agcctttgag cctttcccac attgaagatg gtgaaactag atattcatac
61 tctggctcat cacctcaagc aggaacgctt atatgtaaac tctgagaaac agctcattca
121 gaggctcaat gcagatgtac ttaagacagc tgaaaagttg tatcgtacag catggattgc
181 gaagcaacag agaatcaatt tggatcggct tatcataacc agtgctgaag cttcccctgc
241 tgaatgttgc caacatgcca aaattttgga agatacacaa tttgttgatg ggtataagca
301 attgggattt caggagactg cttatggaga attcttgagt cgattgaggg aaaatcctcg
361 tcttattgcc tcctctttgg ttgctggaga gaaacttaat caggagaaca cacaaagtgt
421 tatttacaca gtttttacct ccctgtatgg caattgcatc atgcaagaag atgaaagcta
481 cctccttcag gttttgcgat acttgattga atttgaactt aaagaaagtg acaaccctag
541 gcgacttttg aggagaggaa cttgtgcctt cagcatctta tttaaacttt tttctgaagg
601 actgttttct gccaaacttt tcctcacagc cactttacat gagccaatta tgcaactgct
661 tgttgaagat gaagatcacc tggaaacaga tccaaacaag ctaattgaga ggttctctcc
721 atctcagcag gaaaaactct ttggagagaa gggctcagat agattcaggc aaaaagttca
781 agaaatggtg gagtccaatg aagcaaagct agtggctttg gtgaacaaat ttattggtta
841 tctcaaacag aacacatatt gttttccaca tagtttaagg tggatcgtgt ctcagatgta
901 caaaaccctc tcctgtgtag ataggctgga agttggggag gtcagggcaa tgtgtactga
961 tctcctgttg gcctgcttca tttgtcctgc agttgtcaat ccagaacaat atggaataat
1021 ttccgatgct cctattaatg aagtagcacg atttaatctg atgcaggtag gccgcctttt
1081 gcagcagtta gcaatgactg gctctgaaga gggagatccc cgaacaaaga gcagccttgg
1141 aaagtttgac aaaagctgtg ttgccgcttt ccttgatgtt gtgattgggg gccgtgcagt
1201 ggagacccct ccattgtctt ccgtcaatct tctggaagga ttgagcagaa ctgtggttta
1261 tataacctac agtcagctta ttactctggt gaattttatg aagagtgtga tgtctggaga
1321 tcaactgaga gaagatagaa tggctcttga caatttattg gcaaacctac ccccggccaa
1381 gccaggaaaa agtagcagtt tagaaatgac tccctacaat acacctcagc tatctccagc
1441 aaccactcca gcaaataaaa agaatcgatt acctatagca actcggagca gaagccgcac
1501 caatatgcta atggacctac atatggacca tgaaggatca tctcaagaaa ccatccagga
1561 ggtgcaacca gaagaggtgt tggtcatttc cttaggtaca ggtccccagc ttactccagg
1621 gatgatgtca gaaaatgagg tcctaaacat gcagctttcg gatggaggac aaggagatgt
1681 ccctgttgat gaaaacaaac tccatggtaa acctgataaa accttgcgct tttccctctg
1741 cagtgataat ctggaaggaa tatctgaagg tccttcaaat cgctccaatt cagtgtcctc
1801 cctagaccta gaaggagagt ctgtgtcaga acttggagca ggaccttctg gcagtaatgg
1861 agttgaagct ctacagctgt tagaacatga gcaagctaca acacaggata accttgatga
1921 taagctaagg aagtttgaaa ttcgtgacat gatgggatta acagatgata gggacatatc
1981 agaaacagtg agtgagacct ggagtacaga cgtcttggga agtgactttg accctaatat
2041 tgatgaagat cgcttgcaag aaattgcagg tgctgcagca gagaacatgt taggcagttt
2101 gctgtgcctc ccaggttcag ggtcagtgct tcttgacccc tgcactggtt ctaccatatc
2161 agagacaaca agtgaagctt ggagtgtaga ggtattgcca agtgactcag aggccccaga
2221 cctaaagcag gaggagcgtc tgcaagaact ggagagctgt tctggactgg gtagcacatc
2281 tgatgatacg gatgtcaggg aggtcagttc ccgccccagc acaccaggcc tcagtgttgt
2341 gtccggcata agtgcaacct ctgaggatat tcccaataag attgaagacc tgagatctga
2401 gtgcagctct gattttgggg gtaaagattc tgtcactagt ccagacatgg atgaaataac
2461 tcacgatttt ctttatatac ttcagccaaa acaacatttt caacacattg aagcagaagc
2521 agacatgaga atccagctgt cttctagtgc ccaccagctg acctctcctc cttctcagtc
2581 agagtctctg ctggccatgt ttgatccact gtcttcacat gaaggggctt ctgctgtggt
2641 aaggccaaag gttcactatg ctaggccatc gcatccacca ccagatcccc caatcctgga
2701 aggagctgtg ggaggaaatg aggccaggtt gccaaacttt ggttcccatg ttttaactcc
2761 agctgaaatg gaggcattca agcaaaggca ttcttaccct gagagactag ttcgaagcag
2821 gagctctgat atagtatctt ctgtccggag acccatgagt gaccccagct ggaaccggcg
2881 tccaggaaat gaagagcgag aactccctcc agctgcagcc attggtgcta cttctttggt
2941 ggctgcacct cattcatcat cttcatcccc gagtaaggac tcctcaagag gagagactga
3001 agaacgcaaa gatagcgatg atgagaaatc agacaggaac agaccttggt ggagaaaacg
3061 ttttgtttca gccatgccta aagctcctat accaaaaaaa aaaaaaaaaa a
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