LOCUS BC010004 1345 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase), mRNA (cDNA clone MGC:15352 IMAGE:4132071), complete cds. ACCESSION BC010004 VERSION BC010004.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1345) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1345) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Dec 9, 2003 this sequence version replaced BC010004.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 26 Row: l Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 41281370. FEATURES Location/Qualifiers source 1..1345 /db_xref="H-InvDB:HIT000034730" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:15352 IMAGE:4132071" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1345 /gene="FDPS" /gene_synonym="FPS" /db_xref="GeneID:2224" /db_xref="HGNC:HGNC:3631" /db_xref="MIM:134629" CDS 9..1268 /gene="FDPS" /gene_synonym="FPS" /codon_start=1 /product="farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase)" /protein_id="AAH10004.1" /db_xref="GeneID:2224" /db_xref="HGNC:HGNC:3631" /db_xref="MIM:134629" /translation="MPLSRWLRSVGVFLLPAPYWAPRERWLGSLRRPSLVHGYPVLAW HSARCWCQAWTEEPRALCSSLRMNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHP EIGDAIARLKEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVEL LQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQPY YLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPI AAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKCS WLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYEELDLPAVFLQYEEDSYSHIM ALIEQYAAPLPPAVFLGLARKIYKRRK" BASE COUNT 331 a 337 c 388 g 289 t ORIGIN 1 ggaacaggat gcccctgtcc cgctggttga gatctgtggg ggtcttcctg ctgccagccc 61 cctactgggc accccgggag aggtggctgg gttccctacg gcggccctcc ctggtgcacg 121 ggtacccagt cctggcctgg cacagtgccc gctgctggtg ccaagcgtgg acagaggaac 181 ctcgagccct ttgctcctcc ctcagaatga acggagacca gaattcagat gtttatgccc 241 aagaaaagca ggatttcgtt cagcacttct cccagatcgt tagggtgctg actgaggatg 301 agatggggca cccagagata ggagatgcta ttgcccggct caaggaggtc ctggagtaca 361 atgccattgg aggcaagtat aaccggggtt tgacggtggt agtagcattc cgggagctgg 421 tggagccaag gaaacaggat gctgatagtc tccagcgggc ctggactgtg ggctggtgtg 481 tggaactgct gcaagctttc ttcctggtgg cagatgacat catggattca tcccttaccc 541 gccggggaca gatctgctgg tatcagaagc cgggcgtggg tttggatgcc atcaatgatg 601 ctaacctcct ggaagcatgt atctaccgcc tgctgaagct ctattgccgg gagcagccct 661 attacctgaa cctgatcgag ctcttcctgc agagttccta tcagactgag attgggcaga 721 ccctggacct cctcacagcc ccccagggca atgtggatct tgtcagattc actgaaaaga 781 ggtacaaatc tattgtcaag tacaagacag ctttctactc cttctacctt cctatagctg 841 cagccatgta catggcagga attgatggcg agaaggagca cgccaatgcc aagaagatcc 901 tgctggagat gggggagttc tttcagattc aggatgatta ccttgacctc tttggggacc 961 ccagtgtgac cggcaaaatt ggcactgaca tccaggacaa caaatgcagc tggctggtgg 1021 ttcagtgtct gcaacgggcc actccagaac agtaccagat cctgaaggaa aattacgggc 1081 agaaggaggc tgagaaagtg gcccgggtga aggcgctata tgaggagctg gatctgccag 1141 cagtgttctt gcaatatgag gaagacagtt acagccacat tatggctctc attgaacagt 1201 acgcagcacc cctgccccca gccgtctttc tggggcttgc gcgcaaaatc tacaagcgga 1261 gaaagtgacc tagagattgc aagggcgggg agaggaggct ctcaataaat aatcgtgtaa 1321 ccttaaaaaa aaaaaaaaaa aaaaa //