LOCUS BC009994 2144 bp mRNA linear HUM 26-NOV-2007
DEFINITION Homo sapiens jumonji domain containing 3, histone lysine
demethylase, mRNA (cDNA clone IMAGE:4129810), partial cds.
ACCESSION BC009994
VERSION BC009994.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2144)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2144)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: j Column: 10.
FEATURES Location/Qualifiers
source 1..2144
/db_xref="H-InvDB:HIT000087423"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4129810"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2144
/gene="JMJD3"
/db_xref="GeneID:23135"
/db_xref="HGNC:HGNC:29012"
/db_xref="MIM:611577"
CDS <1..1937
/gene="JMJD3"
/codon_start=3
/product="JMJD3 protein"
/protein_id="AAH09994.1"
/db_xref="GeneID:23135"
/db_xref="HGNC:HGNC:29012"
/db_xref="MIM:611577"
/translation="EGRAKAKAKVPKEKSRRVLGNLDLQSEEIQGREKSRPDLGGASK
AKPPTAPAPPSAPAPSAQPTPPSASVPGKKAREEAPGPPGVSRADMLKLRSLSEGPPK
ELKIRLIKVESGDKETFIASEVEERRLRMADLTISHCAADVVRASRNAKVKGKFRESY
LSPAQSVKPKINTEEKLPREKLNPPTPSIYLESKRDAFSPVLLQFCTDPRNPITVIRG
LAGSLRLNLGLFSTKTLVEASGEHTVEVRTQVQQPSDENWDLTGTRQIWPCESSRSHT
TIAKYAQYQASSFQESLQEEKESEDEESEEPDSTTGTPPSSAPDPKNHHIIKFGTNID
LSDAKRWKPQLQELLKLPAFMRVTSTGNMLSHVGHTILGMNTVQLYMKVPGSRTPGHQ
ENNNFCSVNINIGPGDCEWFAVHEHYWETISAFCDRHGVDYLTGSWWPILDDLYASNI
PVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTAYQYQLALERYEWNEVKN
VKSIVPMIHVSWNVARTVKISDPDLFKMIKFCLLQSMKHCQVQRESLVRAGKKIAYQG
RVKDEPAYYCNECDVEVFNILFVTSENGSRNTYLVHCEGCARRRSAGLQGVVVLEQYR
TEELAQAYDAFTLAPASTSR"
BASE COUNT 491 a 655 c 626 g 372 t
ORIGIN
1 gtgagggcag ggcaaaggcc aaggccaagg tccccaaaga aaagagccgc cgggtgctgg
61 ggaacctgga cctgcagagc gaggagatcc agggtcgtga gaagtcccgg cccgatcttg
121 gcggggcctc caaggccaag ccacccacag ctccagcccc tccatcagct cctgcacctt
181 ctgcccagcc cacacccccg tcagcctctg tccctggaaa gaaggctcgg gaggaagccc
241 cagggccacc gggtgtcagc cgggccgaca tgctgaagct gcgctcactt agtgaggggc
301 cccccaagga gctgaagatc cggctcatca aggtagagag tggtgacaag gagaccttta
361 tcgcctctga ggtggaagag cggcggctgc gcatggcaga cctcaccatc agccactgtg
421 ctgctgacgt cgtgcgcgcc agcaggaatg ccaaggtgaa agggaagttt cgagagtcct
481 acctttcccc tgcccagtct gtgaaaccga agatcaacac tgaggagaag ctgccccggg
541 aaaaactcaa cccccctaca cccagcatct atctggagag caaacgggat gccttctcac
601 ctgtcctgct gcagttctgt acagaccctc gaaatcccat cacagtgatc cggggcctgg
661 cgggctccct gcggctcaac ttgggcctct tctccaccaa gaccctggtg gaagcgagtg
721 gcgaacacac cgtggaagtt cgcacccagg tgcagcagcc ctcagatgag aactgggatc
781 tgacaggcac tcggcagatc tggccttgtg agagctcccg ttcccacacc accattgcca
841 agtacgcaca gtaccaggcc tcatccttcc aggagtctct gcaggaggag aaggagagtg
901 aggatgagga gtcagaggag ccagacagca ccactggaac ccctcctagc agcgcaccag
961 acccgaagaa ccatcacatc atcaagtttg gcaccaacat cgacttgtct gatgctaagc
1021 ggtggaagcc ccagctgcag gagctgctga agctgcccgc cttcatgcgg gtaacatcca
1081 cgggcaacat gctgagccac gtgggccaca ccatcctggg catgaacacg gtgcagctgt
1141 acatgaaggt gcccggcagc cgaacgccag gccaccagga gaataacaac ttctgctccg
1201 tcaacatcaa cattggccca ggcgactgcg agtggttcgc ggtgcacgag cactactggg
1261 agaccatcag cgctttctgt gatcggcacg gcgtggacta cttgacgggt tcctggtggc
1321 caatcctgga tgatctctat gcatccaata ttcctgtgta ccgcttcgtg cagcgacccg
1381 gagacctcgt gtggattaat gcggggactg tgcactgggt gcaggccacc ggctggtgca
1441 acaacattgc ctggaacgtg gggcccctca ccgcctatca gtaccagctg gccctggaac
1501 gatacgagtg gaatgaggtg aagaacgtca aatccatcgt gcccatgatt cacgtgtcat
1561 ggaacgtggc tcgcacggtc aaaatcagcg accccgactt gttcaagatg atcaagttct
1621 gcctgctgca gtccatgaag cactgccagg tgcaacgcga gagcctggtg cgggcaggga
1681 agaaaatcgc ttaccagggc cgtgtcaagg acgagccagc ctactactgc aacgagtgcg
1741 atgtggaggt gtttaacatc ctgttcgtga caagtgagaa tggcagccgc aacacgtacc
1801 tggtacactg cgagggctgt gcccggcgcc gcagcgcagg cctgcagggc gtggtggtgc
1861 tggagcagta ccgcactgag gagctggctc aggcctacga cgccttcacg ctggccccag
1921 ccagcacgtc gcgatgaggc cggacgcccc gcccgcctgc ctgcccgcgc aaggcgccgc
1981 ggggccacca gcacatgcct gggctggacc taggtcccgc ctgtggccga gaagggggtc
2041 gggcccagcc cttccacccc attggcagct cccctcactt aatttattaa gaaaaacttt
2101 tttttttttt tttagcaaat atgaggaaaa aaaaaaaaaa aaaa
//