LOCUS BC009988 3039 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens heterogeneous nuclear ribonucleoprotein U-like 1, mRNA
(cDNA clone MGC:16706 IMAGE:4127873), complete cds.
ACCESSION BC009988
VERSION BC009988.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3039)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3039)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC009988.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: h Column: 8.
FEATURES Location/Qualifiers
source 1..3039
/db_xref="H-InvDB:HIT000034717"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16706 IMAGE:4127873"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3039
/gene="HNRPUL1"
/gene_synonym="E1B-AP5"
/gene_synonym="E1BAP5"
/gene_synonym="FLJ12944"
/db_xref="GeneID:11100"
/db_xref="HGNC:HGNC:17011"
/db_xref="MIM:605800"
CDS 277..2547
/gene="HNRPUL1"
/gene_synonym="E1B-AP5"
/gene_synonym="E1BAP5"
/gene_synonym="FLJ12944"
/codon_start=1
/product="HNRPUL1 protein"
/protein_id="AAH09988.2"
/db_xref="GeneID:11100"
/db_xref="HGNC:HGNC:17011"
/db_xref="MIM:605800"
/translation="MDNITRQNQFYDTQVIKQENESGYERRPLEMEQQQAYRPEMKTE
MKQGAPTSFLPPEASQLKPDRQQFQSRKRPYEENRGRGYFEHREDRRGRSPQPPAEED
EDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFE
MKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGEEPFSYGYGGTGKKSTNSRFEN
YGDKFAENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQKEALGGQALYPHVLVKN
CAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPKSKAECEILMMVGLPAAGK
TTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLI
QIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEG
KDVPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVRQYNEEGRKAGPPPEKR
FDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGG
YSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPP
GASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPP
AYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYGNY
DYGSYSGNTQGGTSTQ"
BASE COUNT 759 a 920 c 815 g 545 t
ORIGIN
1 gcctcctgac aggaaaggtt taagggggac agagccctgg gaggccgggc cgggctcggg
61 ggccaccccg ggggcccggg ccatggatgt gcgccgtctg aaggtgaacg aacttcgcga
121 ggagctgcag cgccgcggcc tggacactcg aggcctcaag gccgagcttg ctgagcggct
181 gcaggcggcg ttggaggccg aggagcctga cgacgagcgg gagctcgacg ccgacgacga
241 accggggcga cccgggcaca tcaacgagga gatgccatgg acaatattac caggcagaac
301 caattctacg atacccaagt catcaaacaa gaaaacgagt caggctacga gaggagacca
361 ctggaaatgg agcagcagca ggcctatcgt ccagaaatga agacagagat gaagcaagga
421 gcacccacca gcttcctccc gcctgaagct tctcaactca agccagacag gcagcaattc
481 cagagtcgaa agaggcctta tgaagaaaac cggggacggg ggtactttga gcaccgagag
541 gataggaggg gccgctctcc tcagcctcct gctgaagagg atgaagatga ctttgatgat
601 acccttgttg ctattgacac ctataactgc gacctccact tcaaggtggc ccgagatcgg
661 agtagtggct atccgctcac aattgagggc tttgcatacc tgtggtcagg agcccgtgcc
721 agctatgggg tcagaagggg ccgtgtatgc ttcgagatga agatcaatga ggaaatctcc
781 gtgaagcacc ttccgtctac agagcctgac ccccacgtgg tccgtatcgg ctggtccctg
841 gactcctgca gcacccagct aggcgaagag cctttctcct atggctatgg aggcactggg
901 aagaagtcca ccaatagccg gtttgaaaac tacggagaca agtttgcaga gaacgatgtg
961 attggctgct ttgcggattt tgaatgtgga aatgacgtgg aactgtcttt taccaagaat
1021 ggaaagtgga tgggcattgc tttccgaatc cagaaggaag ccttgggggg tcaggccctc
1081 tatcctcatg tcctggtgaa gaattgcgca gtggagttca acttcggaca gagagcagag
1141 ccctactgtt ctgtcctccc ggggtttacc ttcatccagc accttcccct tagtgagcgt
1201 atccggggca ccgttggacc aaagagcaag gcagaatgtg agattctgat gatggtgggc
1261 ctgcctgctg ctggcaagac cacatgggcc atcaaacatg cagcctccaa cccttccaag
1321 aagtacaaca tcctgggtac caatgccatc atggataaga tgcgggtgat gggcctacgc
1381 cggcagcgga actatgctgg ccgctgggat gtcctgatcc agcaggccac ccagtgcctc
1441 aaccgcctca tccagattgc tgcccgcaag aaacgcaact atatcctaga tcagacaaat
1501 gtttatgggt cagcccagag acgaaaaatg agaccatttg aaggcttcca gcgcaaagct
1561 attgtaattt gtcccactga cgaggaccta aaagaccgaa caataaagcg aaccgacgag
1621 gaagggaagg atgtcccaga tcatgcggtc ttagaaatga aagccaactt cacgttgcca
1681 gatgttgggg acttcctgga tgaggttctg ttcattgagc tgcagcggga ggaagcggac
1741 aagctagtga ggcagtacaa cgaggaaggc cgcaaggctg ggccaccccc tgaaaagcgc
1801 tttgacaacc gaggtggtgg tggcttccgg ggccgcgggg gtggtggtgg cttccagcgc
1861 tatgaaaacc gaggaccccc tggaggcaac cgtggcggct tccagaaccg agggggaggc
1921 agcggtggag gaggcaacta ccgaggaggt ttcaaccgca gcggaggtgg tggctatagc
1981 cagaaccgct ggggtaacaa caaccgggat aacaacaact ccaacaacag aggcagctac
2041 aaccgggctc cccagcaaca gccgccacca cagcagcctc cgccaccaca gccaccaccc
2101 cagcagccac cgccaccacc cagctacagc cctgctcgga accccccagg ggccagcacc
2161 tacaataaga acagcaacat ccctggctca agcgccaata ccagcacccc caccgtcagc
2221 agctacagcc ctccacagcc gagttacagc cagccaccct acaaccaggg aggttacagc
2281 cagggctaca cagccccacc gcctccacct ccaccaccac ctgcctacaa ctatgggagc
2341 tacggcggtt acaacccggc cccctatacc ccaccgccac cccccaccgc acagacctac
2401 cctcagccca gctataacca gtatcagcag tatgcccagc agtggaacca gtactatcag
2461 aaccagggcc agtggccgcc atactacggg aactacgact acgggagcta ctccgggaac
2521 acacagggtg gcacaagtac acagtagcca gtgtgaccca gaggctcccg gaggcccctg
2581 ccggcttcct ccaccagcgc ctgcctcggc ccctcctctg cccccgccag atcccgtggt
2641 gctggggatg gggtcatccc agggctgcct ccctccagcc cactgcctcc cctctgaggg
2701 gcttccttcc cctccatagg gccaggcatt tttttctgga ttcaaacagg caacaatgac
2761 cttttatttt ctgtttgtcc ccacctcccc agccttccac ctcctgttct tcctaccttc
2821 ttcctttttg actaaataat ccccacctcc cttgatcata cagtgaggct acagtgactg
2881 aggggagaat cccctcctgt tcactctccc aaccctgctc cagcccctca gcttcccaga
2941 ccctcatgca gttggttgta aattctccca ggagctgttt tactgtctac ttttcaggat
3001 taaaaaaaaa atcaaaactt aaaaaaaaaa aaaaaaaaa
//