LOCUS BC009978 1540 bp mRNA linear HUM 08-SEP-2006
DEFINITION Homo sapiens actin, alpha, cardiac muscle 1, mRNA (cDNA clone
MGC:16637 IMAGE:4121697), complete cds.
ACCESSION BC009978
VERSION BC009978.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1540)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1540)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC009978.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: d Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46411161.
FEATURES Location/Qualifiers
source 1..1540
/db_xref="H-InvDB:HIT000034710"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16637 IMAGE:4121697"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1540
/gene="ACTC1"
/gene_synonym="CMD1R"
/db_xref="GeneID:70"
/db_xref="HGNC:HGNC:143"
/db_xref="MIM:102540"
CDS 206..1339
/gene="ACTC1"
/gene_synonym="CMD1R"
/codon_start=1
/product="actin, alpha, cardiac muscle 1"
/protein_id="AAH09978.1"
/db_xref="GeneID:70"
/db_xref="HGNC:HGNC:143"
/db_xref="MIM:102540"
/translation="MCDDEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQG
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEE
HPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDG
VTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKL
CYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGI
HETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP
PERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPSIVHRKCF"
BASE COUNT 358 a 455 c 374 g 353 t
ORIGIN
1 cctcggcagt cctagcgggt gcgaagggga ccaaataagg caaggtggca gaccgggccc
61 cccacccctg cccccggctg ctccaactga ccctgtccat cagcgttcta taaagcggcc
121 ctcctggagc cagccaccca gagcccgctg ccgccggagc cgagccgacc cgccccgccg
181 acgaaccccc tgaagctgtg ccaagatgtg tgacgacgag gagaccaccg ccctggtgtg
241 cgacaacggc tctgggctgg tgaaggccgg ctttgcgggc gatgacgcgc cccgcgctgt
301 cttcccgtcc atcgtgggcc gcccgcggca ccagggagtt atggtgggta tgggtcagaa
361 ggactcctac gtaggtgatg aagcccagag caagagaggc atcctgaccc tgaagtatcc
421 catcgagcat ggtatcatca ccaactggga cgacatggag aagatctggc accacacctt
481 ctacaatgag ctccgtgtgg ctcccgagga gcaccccacc ctgctcacag aggccccgct
541 gaaccccaag gccaaccggg agaagatgac tcagatcatg tttgagacct tcaatgtccc
601 tgccatgtac gtggccatcc aggcagtgct atccctgtat gcttctggcc gtaccacagg
661 cattgttctg gactctgggg atggtgtaac tcacaatgtc cccatctatg agggctacgc
721 tttgccccat gccatcatgc gtctggatct ggctggtcgg gacctcactg actacctcat
781 gaagatcctc actgagcgtg gctactcctt tgtcaccact gctgaacgtg aaattgtccg
841 tgacattaaa gagaagctgt gctatgtcgc cctggatttt gagaatgaga tggccacagc
901 tgcctcttcc tcctccctgg agaagagcta tgaactgcct gatggccaag tcatcactat
961 tggcaatgag cgcttccgct gtcctgagac actcttccag ccctccttca ttggtatgga
1021 atctgctggc atccatgaaa caacttacaa tagcatcatg aagtgtgaca ttgatatccg
1081 caaggacctg tatgccaaca atgtcttatc tggaggcacc actatgtacc ctggtattgc
1141 tgatcgtatg cagaaggaaa tcactgctct ggctcctagc accatgaaga ttaagattat
1201 tgctccccct gagcgtaaat actctgtctg gattgggggc tccatcctgg cctctctgtc
1261 caccttccag caaatgtgga ttagcaagca agagtacgat gaggcaggcc catccattgt
1321 ccaccgcaaa tgcttctaag atgccttctc tctccatcta ccttccagtc aggatgacgg
1381 tattatgctt cttggagtct tccaaaccac cttccctcat ctttcatcaa tcattgtaca
1441 gtttgtttac acacgtgcaa tttgtttgtg cttctaatat ttattgcttt ataaataaac
1501 cagaccagga cttgcaacct aaaaaaaaaa aaaaaaaaaa
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