LOCUS BC009955 2181 bp mRNA linear HUM 11-DEC-2003
DEFINITION Homo sapiens sialic acid binding Ig-like lectin 10, mRNA (cDNA
clone IMAGE:4297851), partial cds.
ACCESSION BC009955
VERSION BC009955.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2181)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2181)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC009955.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: j Column: 8.
FEATURES Location/Qualifiers
source 1..2181
/db_xref="H-InvDB:HIT000087418"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4297851"
/tissue_type="Primary B-Cells from Tonsils"
/clone_lib="NIH_MGC_48"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2181
/gene="SIGLEC10"
/gene_synonym="SIGLEC-10"
/gene_synonym="SLG2"
/db_xref="GeneID:89790"
/db_xref="MIM:606091"
CDS <1..1086
/gene="SIGLEC10"
/gene_synonym="SIGLEC-10"
/gene_synonym="SLG2"
/codon_start=1
/product="SIGLEC10 protein"
/protein_id="AAH09955.2"
/db_xref="GeneID:89790"
/db_xref="MIM:606091"
/translation="DLSVQYPPENLRVMVSQANRTVLENLGNGTSLPVLEGQSLCLVC
VTHSSPPARLSWTQRGQVLSPSQPSDPGVLELPRVQVEHEGEFTCHARHPLGSQHVSL
SLSVHYSPKLLGPSCSWEAEGLHCSCSSQASPAPSLRWWLGEELLEGNSSQDSFEVTP
SSAGPWANSSLSLHGGLSSGLRLRCEAWNVHGAQSGSILQLPDKKGLISTAFSNGAFL
GIGITALLFLCLALIIMKILPKRRTQTETPRPRFSRHSTILDYINVVPTAGPLAQKRN
QKATPNSPRTPLPPGAPSPESKKNQKKQYQLPSFPEPKSSTQAPESQESQEELHYATL
NFPGVRPRPEARMPKGTQADYAEVKFQ"
misc_feature 100..318
/gene="SIGLEC10"
/gene_synonym="SIGLEC-10"
/gene_synonym="SLG2"
/note="IG_like; Region: Immunoglobulin like"
/db_xref="CDD:cd00097"
BASE COUNT 554 a 632 c 554 g 441 t
ORIGIN
1 gacctctctg tgcagtatcc tccagagaac ctgagagtga tggtttccca agcaaacagg
61 acagtcctgg aaaaccttgg gaacggcacg tctctcccag tactggaggg ccaaagcctg
121 tgcctggtct gtgtcacaca cagcagcccc ccagccaggc tgagctggac ccagagggga
181 caggttctga gcccctccca gccctcagac cccggggtcc tggagctgcc tcgggttcaa
241 gtggagcacg aaggagagtt cacctgccac gctcggcacc cactgggctc ccagcacgtc
301 tctctcagcc tctccgtgca ctactccccg aagctgctgg gcccctcctg ctcctgggag
361 gctgagggtc tgcactgcag ctgctcctcc caggccagcc cggccccctc tctgcgctgg
421 tggcttgggg aggagctgct ggaggggaac agcagccagg actccttcga ggtcaccccc
481 agctcagccg ggccctgggc caacagctcc ctgagcctcc atggagggct cagctccggc
541 ctcaggctcc gctgtgaggc ctggaacgtc catggggccc agagtggatc catcctgcag
601 ctgccagata agaagggact catctcaacg gcattctcca acggagcgtt tctgggaatc
661 ggcatcacgg ctcttctttt cctctgcctg gccctgatca tcatgaagat tctaccgaag
721 agacggactc agacagaaac cccgaggccc aggttctccc ggcacagcac gatcctggat
781 tacatcaatg tggtcccgac ggctggcccc ctggctcaga agcggaatca gaaagccaca
841 ccaaacagtc ctcggacccc tcttccacca ggtgctccct ccccagaatc aaagaagaac
901 cagaaaaagc agtatcagtt gcccagtttc ccagaaccca aatcatccac tcaagcccca
961 gaatcccagg agagccaaga ggagctccat tatgccacgc tcaacttccc aggcgtcaga
1021 cccaggcctg aggcccggat gcccaagggc acccaggcgg attatgcaga agtcaagttc
1081 caatgagggt ctcttaggct ttaggactgg gacttcggct agggaggaag gtagagtaag
1141 aggttgaaga taacagagtg caaagtttcc ttctctccct ctctctctct ctttctctct
1201 ctctctctct ttctctctct tttaaaaaaa catctggcca gggcacagtg gctcacgcct
1261 gtaatcccag cactttggga ggttgaggtg ggcagatcgc ctgaggtcgg gagttcgaga
1321 ccagcctggc caacttggtg aaaccccgtc tctactaaaa atacaaaaat tagctgggca
1381 tggtggcagg cgcctgtaat cctacctact tgggaagctg aggcaggaga atcacttgaa
1441 cctgggagac ggaggttgca gtgagccaag atcacaccat tgcatgccag cctgggcaac
1501 aaagcgagac tccatctcaa aaaaaaaatc ctccaaatgg gttgggtgtc tgtaatccca
1561 gcactttggg aggctaaggt gggtggattg cttgagccca ggagttcgag accagcctgg
1621 gcaacatggt gaaaccccat ctctacaaaa aatacaaaac atagctgggc ttggtggtgt
1681 gtgcctgtag tcccagctgt cagacattta aaccagagca actccatctg gaataggagc
1741 tgaatacaat gaggctgaga cctactgggc tgcattctca gacagtggag gcattctaag
1801 tcacaggatg agacaggagg tccgtacaag atacaggtca taaagacttt gctgataaaa
1861 cagattgcag taaagaagcc aaccaaatcc caccaaaacc aagttggcca cgagagtgac
1921 ctctggtcgt cctcactgct acactcctga cagcaccatg acagtttaca aatgccatgg
1981 caacatcagg aagttacccg atatgtccca aaagggggag gaatgaataa tccacccctt
2041 gtttagcaaa taagcaagaa ataaccataa aagtgggcaa ccagcagctc taggcgctgc
2101 tcttgtctat ggagtagcca ttcttttgtt cctttacttt cttaataaac ttgctttcac
2161 cttaaaaaaa aaaaaaaaaa a
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