LOCUS BC009954 2811 bp mRNA linear HUM 11-DEC-2003 DEFINITION Homo sapiens cleavage and polyadenylation specific factor 1, 160kDa, mRNA (cDNA clone IMAGE:4130156), partial cds. ACCESSION BC009954 VERSION BC009954.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2811) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2811) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Dec 9, 2003 this sequence version replaced BC009954.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 20 Row: h Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..2811 /db_xref="H-InvDB:HIT000087417" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4130156" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" BASE COUNT 596 a 875 c 855 g 485 t ORIGIN 1 aggacaatcc caagggggag ggcacagagc aggaacccag caccacccct gaagcagacg 61 acgatggccg cagacacgga ttcctgattc tgagccggga agactccacc atgatcctgc 121 agacggggca ggagatcatg gagctggaca ccagtggctt cgccactcag ggccccacgg 181 tctttgctgg gaacatcggg gacaaccgct acattgtcca agtgtcacca ctgggcatcc 241 gcctgctgga aggagtgaat cagctgcact tcatccccgt ggacctgggc gcccccatcg 301 tgcagtgcgc cgtggccgac ccctatgtgg tcatcatgag tgccgagggc cacgtcacca 361 tgttcctgct gaagagtgac tcctacggtg gccgccacca ccgcctggcg ctgcacaagc 421 ccccgctgca ccatcagtcc aaggtgatta cgctgtgcct gtaccgagac ctcagcggca 481 tgttcaccac tgagagccgc ctgggtgggg cccgtgacga gctcgggggc cgcagtggcc 541 cggaggccga gggcctgggc tcagagacta gccccacagt ggatgacgag gaggagatgc 601 tgtatgggga ttcgggctcc ctcttcagcc ccagcaagga ggaggcccga agaagcagcc 661 agccccctgc tgaccgggac cctgcaccct tccgggcaga gcctacccac tggtgcctgc 721 tggtgcggga gaatggcacc atggagatct accagcttcc cgactggcgg ctggtgttcc 781 tggtgaagaa cttccctgtg gggcagcggg tccttgtgga cagctccttt ggacagccca 841 ctacacaggg cgaggcccgc agggaggagg ccacgcgcca gggggagctg cccctcgtca 901 aggaggtgct gctggtggcg ctgggcagcc gccagagcag gccctacctg ctggtgcatg 961 tggaccaaga gctgcttatc tacgaggcct tcccccacga ctctcagctc ggccagggca 1021 atctcaaagt ccgctttaag aaggtccctc acaacatcaa cttccgtgag aagaagccaa 1081 agccatccaa gaagaaagca gaaggccggc gcagaggagg gggctggggc ccggggccgc 1141 gtggcgcgtt tccgctactt cgaggatatt tatggctact caggggtctt catctgcggc 1201 ccctcccctc actggctctt ggtgaccggc cgaggggctc tgcggctaca ccccatggcc 1261 atcgacggcc cggtcgactc tttcgctcca ttccacaatg tcaactgtcc ccgcggcttc 1321 ctgtacttca acagacaggg cgagctgagg atcagtgtcc tgcctgccta cctgtcctat 1381 gatgccccat ggcctgtcag gaagatcccg ctgcgctgca cggcccactg tgtggcttac 1441 cacgtggagt ctaaggtgta tgctgtggcc accagcacca acacgccgtg tgcccgcatc 1501 ccacgcatga ctggcgagga gaaggagttt gagaccatcg agagagatga gcggtacatc 1561 cacccccagc aggaggcctt ctccatccag ctcatctccc cggtcagctg ggaggctatt 1621 cccaatgcca ggatcgagct gcaggagtgg gagcatgtga cctgcatgaa gacagtgtct 1681 ctgcgcagtg aggagaccgt gtcgggcctc aaaggctacg tggccgccgg gacctgcctc 1741 atgcaggggg aggaggtcac gtgccgaggg cggatcttga tcatggatgt gattgaggtg 1801 gtgcccgagc ctggccagcc cttgaccaag aacaagttca aagtccttta cgagaaggag 1861 cagaaggggc ccgtgaccgc cctgtgccac tgcaatggcc acctggtgtc ggccatcggc 1921 cagaagattt tcctgtggag cctgcgggcc agcgagctga cgggcatggc cttcatcgac 1981 acgcagctct acatacacca gatgatcagc gtcaagaact tcatcctggc agccgacgtc 2041 atgaagagca tttcgctgct gcgctaccag gaggaaagca agacgctgag cctggtgtcg 2101 cgggatgcca agcccctgga ggtgtacagc gtggacttca tggtggacaa tgcccagctg 2161 ggttttctgg tgtctgaccg cgaccgcaac ctcatggtgt acatgtacct gcccgaagcc 2221 aaggagagtt tcgggggcat gcgcctgctg cgtcgggcag acttccacgt gggtgcccac 2281 gtgaacacgt tctggaggac cccgtgccgg ggggccactg aagggctcag caaaaagtcg 2341 gtcgtgtggg agaataagca catcacgtgg tttgccaccc tggacggcgg catcgggctg 2401 ctgctgccca tgcaggagaa gacctaccgg cggctgctga tgctgcagaa cgcgctgacc 2461 accatgctgc cacaccacgc cggcctcaac ccccgcgcct tccggatgct gcacgtggac 2521 cgccgcaccc tccagaatgc cgtgcgcaac gtgctggatg gggagctgct caaccgctac 2581 ctgtacctga gcaccatgga gcgcagcgag ctagccaaga agatcggcac cacaccagac 2641 ataatcctgg acgacttgct ggagacggac cgcgtcaccg cccacttcta gccccgtgga 2701 tgccgtcacc accagcacac ggaactacct cccaccccct ttttgtacaa aacacaagga 2761 aaaacatttt ttgcttgaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a //