LOCUS BC009929 931 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens integrin beta 3 binding protein (beta3-endonexin),
mRNA (cDNA clone MGC:796 IMAGE:3505579), complete cds.
ACCESSION BC009929
VERSION BC009929.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 931)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 931)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC009929.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: b Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27597074.
FEATURES Location/Qualifiers
source 1..931
/db_xref="H-InvDB:HIT000034678"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:796 IMAGE:3505579"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..931
/gene="ITGB3BP"
/gene_synonym="CENP-R"
/gene_synonym="CENPR"
/gene_synonym="HSU37139"
/gene_synonym="NRIF3"
/gene_synonym="TAP20"
/db_xref="GeneID:23421"
/db_xref="HGNC:HGNC:6157"
/db_xref="MIM:605494"
CDS 48..581
/gene="ITGB3BP"
/gene_synonym="CENP-R"
/gene_synonym="CENPR"
/gene_synonym="HSU37139"
/gene_synonym="NRIF3"
/gene_synonym="TAP20"
/codon_start=1
/product="integrin beta 3 binding protein
(beta3-endonexin)"
/protein_id="AAH09929.1"
/db_xref="GeneID:23421"
/db_xref="HGNC:HGNC:6157"
/db_xref="MIM:605494"
/translation="MPVKRSLKLDGLLEENSFDPSKITRKKSVITYSPTTGTCQMSLF
ASPTSSEEQKHRNGLSNEKRKKLNHPSLTESKESTTKDNDEFMMLLSKVEKLSEEIME
IMQNLSSIQALEGSRELENLIGISCASHFLKREMQKTKELMTKVNKQKLFEKSTGLPH
KASRHLDSYEFLKAILN"
BASE COUNT 352 a 160 c 167 g 252 t
ORIGIN
1 ctgggttcgt tttattcagc ggcagtggtg ctttcccgaa tctcagaatg cctgttaaaa
61 gatcactgaa gttggatggt ctgttagaag aaaattcatt tgatccttca aaaatcacaa
121 ggaagaaaag tgttataact tattctccaa caactggaac ttgtcaaatg agtctatttg
181 cttctcccac aagttctgaa gagcaaaagc acagaaatgg actatcaaat gaaaagagaa
241 aaaaattgaa tcaccccagt ttaactgaaa gcaaagaatc tacaacaaaa gacaatgatg
301 aattcatgat gttgctatca aaagttgaga aattgtcaga agaaatcatg gagataatgc
361 aaaatttaag tagtatacag gctttggagg gcagtagaga gcttgaaaat ctcattggaa
421 tctcctgtgc atcacatttc ttaaaaagag aaatgcagaa aaccaaagaa ctaatgacaa
481 aagtgaataa acaaaaactg tttgaaaaga gtacaggact tcctcacaaa gcatcacgtc
541 atcttgacag ctatgaattc cttaaagcca ttttaaactg aggcattaag aagaaatgca
601 ctcaccatga gcaccaactt ctgcatctgc ctgatcatat ttaaaggaac agagaaatat
661 ttgtaattaa tctgcccagt aaataccagc tcgtagcagt tggcaggtgc atgtctagat
721 aaaatttctt gcagctaatt taaactttct acacgcacca gtagataatc tcaatgtaaa
781 taatacattt cttcttggct ctttaatgta agccaacatg gagaggaaga tcttgactta
841 tattctgtac cacatacact tctgtggact tttagcattt gtgggtagac ttaataaagc
901 atgtataaaa gtgaaaaaaa aaaaaaaaaa a
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