LOCUS BC009903 1636 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens splicing factor 3a, subunit 2, 66kDa, mRNA (cDNA clone
MGC:2362 IMAGE:2959124), complete cds.
ACCESSION BC009903
VERSION BC009903.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1636)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1636)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC009903.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 2 Row: g Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 54112114.
FEATURES Location/Qualifiers
source 1..1636
/db_xref="H-InvDB:HIT000034656"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2362 IMAGE:2959124"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1636
/gene="SF3A2"
/gene_synonym="PRP11"
/gene_synonym="PRPF11"
/gene_synonym="SAP62"
/gene_synonym="SF3a66"
/db_xref="GeneID:8175"
/db_xref="HGNC:HGNC:10766"
/db_xref="MIM:600796"
CDS 116..1510
/gene="SF3A2"
/gene_synonym="PRP11"
/gene_synonym="PRPF11"
/gene_synonym="SAP62"
/gene_synonym="SF3a66"
/codon_start=1
/product="splicing factor 3a, subunit 2, 66kDa"
/protein_id="AAH09903.1"
/db_xref="GeneID:8175"
/db_xref="HGNC:HGNC:10766"
/db_xref="MIM:600796"
/translation="MDFQHRPGGKTGSGGVASSSESNRDRRERLRQLALETIDINKDP
YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKV
KVEVKKFVKIGRPGYKVTKQRDSEMGQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIE
PPDRRWQYLLMAAEPYETIAFKVPSREIDKAEGKFWTHWNRETKQFFLQFHFKMEKPP
APPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPG
PPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAP
GVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPG
VHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLP
SEGPGNIPPPPPTN"
BASE COUNT 320 a 649 c 428 g 239 t
ORIGIN
1 ctttctttgc ccgccgttcg ccaaacgaag tcgtggaggt ggcgaaacga ggaggagata
61 acgcggcctt gggctctggt gtctcccagt ctgctaaagc cctaaggcca tcaccatgga
121 cttccagcat cgccccgggg gcaagaccgg gagcgggggc gtggcctcct cctccgagag
181 caaccgtgac cgcagggagc gcctccggca gctggccctg gagaccatcg acatcaacaa
241 ggacccgtac ttcatgaaga accacctggg ctcctatgaa tgcaaactct gcctgacact
301 tcacaacaat gaggggagct acctggcaca tacgcagggg aagaagcacc agaccaacct
361 ggcccggcga gcagccaagg aggccaagga ggcccctgcc cagcccgcgc ctgagaaggt
421 caaggtggag gtgaagaagt ttgtgaagat cggccgcccg ggctacaaag tgaccaagca
481 gagagactcg gagatgggcc agcagagcct cctcttccag attgactacc ctgagatcgc
541 cgagggcatc atgccacgtc accgcttcat gtctgcgtac gagcagagga tcgagcctcc
601 ggaccggcgc tggcagtacc tgctcatggc cgccgagccc tacgagacca ttgccttcaa
661 ggtgccgagc agagagatcg acaaggcgga gggcaagttc tggacacact ggaaccggga
721 gaccaagcag ttcttcctcc agttccactt taagatggag aagcccccgg ctccacccag
781 cctccctgct ggcccccctg gggtgaagcg gcctccaccc ccgctgatga acggtctgcc
841 ccctcggcca ccgctgcctg agtctttgcc accgcccccg ccaggaggcc tgcctctgcc
901 acccatgccc cccacagggc ctgcgccctc agggcccccg ggaccacccc agctaccccc
961 gccagctcca ggggtccacc ccccggcccc agtggtgcat ccccctgcat ctggggtcca
1021 tcccccagct cctggcgtcc accccccagc tcctggcgtc catcccccag cccctggggt
1081 ccacccacca acctctgggg tccacccccc agctcctgga gtccaccctc cagcccccgg
1141 ggttcaccca ccagcccccg gagtccaccc accagcccct ggggttcacc caccagcccc
1201 aggggtccat cctcccccat cagcgggggt tcacccccag gccccggggg tgcacccagc
1261 agcccccgcc gttcaccctc aggccccagg ggtgcaccca ccagccccag ggatgcaccc
1321 tcaggccccg ggggtccacc cccaacctcc cggggtccat ccgtcggctc ctggggtcca
1381 ccctcagcct ccgggagttc acccctcaaa tcctggggtg caccccccaa ctcccatgcc
1441 cccaatgctg aggcccccac ttccctccga aggcccaggg aacatacctc cccctccccc
1501 aaccaactga gaagctgctc cctcccccag caagcccagc gccaggtgct cttgcctttt
1561 cccactgaga gaaggctgct cttttgtact gccccccgct cattaaacag cctcccccaa
1621 aaaaaaaaaa aaaaaa
//