LOCUS BC009848 1962 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens actin, gamma 1, mRNA (cDNA clone MGC:15376
IMAGE:3939552), complete cds.
ACCESSION BC009848
VERSION BC009848.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1962)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1962)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC009848.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: e Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11038618.
FEATURES Location/Qualifiers
source 1..1962
/db_xref="H-InvDB:HIT000034614"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15376 IMAGE:3939552"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1962
/gene="ACTG1"
/gene_synonym="ACT"
/gene_synonym="beta-actin"
/db_xref="GeneID:71"
/db_xref="HGNC:HGNC:144"
/db_xref="MIM:102560"
CDS 57..1184
/gene="ACTG1"
/gene_synonym="ACT"
/gene_synonym="beta-actin"
/codon_start=1
/product="actin, gamma 1"
/protein_id="AAH09848.1"
/db_xref="GeneID:71"
/db_xref="HGNC:HGNC:144"
/db_xref="MIM:102560"
/translation="MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM
VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP
VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVT
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY
VALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE
TTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE
RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF"
BASE COUNT 474 a 528 c 509 g 451 t
ORIGIN
1 agctctcgca ctctgttctt ccgccgctcc gccgtcgcgt ttctctgccg gtcgcaatgg
61 aagaagagat cgccgcgctg gtcattgaca atggctccgg catgtgcaaa gctggttttg
121 ctggggacga cgctccccga gccgtgtttc cttccatcgt cgggcgcccc agacaccagg
181 gcgtcatggt gggcatgggc cagaaggact cctacgtggg cgacgaggcc cagagcaagc
241 gtggcatcct gaccctgaag taccccattg agcatggcat cgtcaccaac tgggacgaca
301 tggagaagat ctggcaccac accttctaca acgagctgcg cgtggccccg gaggagcacc
361 cagtgctgct gaccgaggcc cccctgaacc ccaaggccaa cagagagaag atgactcaga
421 ttatgtttga gaccttcaac accccggcca tgtacgtggc catccaggcc gtgctgtccc
481 tctacgcctc tgggcgcacc actggcattg tcatggactc tggagacggg gtcacccaca
541 cggtgcccat ctacgagggc tacgccctcc cccacgccat cctgcgtctg gacctggctg
601 gccgggacct gaccgactac ctcatgaaga tcctcactga gcgaggctac agcttcacca
661 ccacggccga gcgggaaatc gtgcgcgaca tcaaggagaa gctgtgctac gtcgccctgg
721 acttcgagca ggagatggcc accgccgcat cctcctcttc tctggagaag agctacgagc
781 tgcccgatgg ccaggtcatc accattggca atgagcggtt ccggtgtccg gaggcgctgt
841 tccagccttc cttcctgggt atggaatctt gcggcatcca cgagaccacc ttcaactcca
901 tcatgaagtg tgacgtggac atccgcaaag acctgtacgc caacacggtg ctgtcgggcg
961 gcaccaccat gtacccgggc attgccgaca ggatgcagaa ggagatcacc gccctggcgc
1021 ccagcaccat gaagatcaag atcatcgcac ccccagagcg caagtactcg gtgtggatcg
1081 gtggctccat cctggcctca ctgtccacct tccagcagat gtggattagc aagcaggagt
1141 acgacgagtc gggcccctcc atcgtccacc gcaaatgctt ctaaacggac tcagcagatg
1201 cgtagcattt gctgcatggg ttaattgaga atagaaattt gcccctggca aatgcacaca
1261 cctcatgcta gcctcacgaa actggaataa gccttcgaaa agaaattgtc cttgaagctt
1321 gtatctgata tcagcactgg attgtagaac ttgttgctga ttttgacctt gtattgaagt
1381 taactgttcc ccttggtatt tgtttaatac cctgtacata tctttgagtt caacctttag
1441 tacgtgtggc ttggtcactt cgtggctaag gtaagaacgt gcttgtggaa gacaagtctg
1501 tggcttggtg agtctgtgtg gccagcagcc tctgatctgt gcagggtatt aacgtgtcag
1561 ggctgagtgt tctgggattt ctctagaggc tggcaagaac cagttgtttt gtcttgcggg
1621 tctgtcaggg ttggaaagtc caagccgtag gacccagttt cctttcttag ctgatgtctt
1681 tggccagaac accgtgggct gttacttgct ttgagttgga agcggtttgc atttacgcct
1741 gtaaatgtat tcattcttaa tttatgtaag gttttttttg tacgcaattc tcgattcttt
1801 gaagagatga caacaaattt tggttttcta ctgttatgtg agaacattag gccccagcaa
1861 cacgtcattg tgtaaggaaa aataaaagtg ctgccgtaac caaaaaaaaa aaaaaaaaaa
1921 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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