LOCUS BC009843 1934 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens rabphilin 3A homolog (mouse), mRNA (cDNA clone
IMAGE:3944479), partial cds.
ACCESSION BC009843
VERSION BC009843.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1934)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1934)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC009843.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: g Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45267836.
FEATURES Location/Qualifiers
source 1..1934
/db_xref="H-InvDB:HIT000087390"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3944479"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>1934
/gene="RPH3A"
/db_xref="GeneID:22895"
/db_xref="HGNC:HGNC:17056"
CDS 70..>1934
/gene="RPH3A"
/codon_start=1
/product="RPH3A protein"
/protein_id="AAH09843.1"
/db_xref="GeneID:22895"
/db_xref="HGNC:HGNC:17056"
/translation="MTDTVFSNSSNRWMYPSDRPLQSKLQAGWSVHPGGQPDRQRKQE
ELTDEEKEIINRVIARAEKMEEMEQERIGRLVDRLENMRKNVAGDGVNRCILCGEQLG
MLGSACVVCEDCKKNVCTKCGVETNNRLHSVWLCKICIEQREVWKRSGAWFFKGFPKQ
VLPQPMPIKKTKPQQPVSEPAAPEQPAPEPKHPARAPARGDSEDRRGPGQKTGPDPAS
APGRGNYGPPVRRASEARMSSSSRDSESWDHSGGAGDSSRSPAGLRRANSVQASRPAP
GSVQSPAPPQPGQPGTPGGSRPGPGPAGRFPDQKPEVAPSDPGTTAPPREERTGGVGG
YPAVGAREDRMSHPSGPYSQASAAAPQPAAARQPPPPEEEEEEANSYDSDEATTLGAL
EFSLLYDQDNSSLQCTIIKAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNT
RNPIWNETLVYHGITDEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKPNQRKNF
NICLERVIPMKRAGTTGSARGMALYEEEQVERVGDIEERGKILVSLMYSTQQGGLIVG
IIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQKKKKKKKKKKKKKKKKKK"
BASE COUNT 525 a 547 c 552 g 310 t
ORIGIN
1 gttggcaaga atttggctca cccattcccc ctgcaagcct ccagcgtcgc ggagcactag
61 acatctacta tgactgacac cgtgttcagc aacagttcta accgttggat gtaccccagt
121 gaccggcccc ttcaatcaaa gctccaggca ggctggtccg tccaccccgg tggtcagcct
181 gacaggcaga ggaagcagga agagctgact gatgaggaga aagaaatcat caacagggtg
241 attgctcgag ctgagaaaat ggaagagatg gagcaggagc gaatcggacg cctggtggac
301 cgcctagaaa acatgaggaa gaacgtggct ggagatgggg tgaaccgctg catactgtgt
361 ggagaacagc tggggatgct gggctctgcc tgtgtagtat gtgaggactg taagaagaac
421 gtctgcacca agtgcggagt ggagaccaac aaccgcctgc attctgtgtg gctctgcaaa
481 atctgcattg agcagaggga ggtgtggaag cgttctggag cgtggttctt caaaggcttc
541 cccaaacagg tcctcccaca gcctatgcct ataaagaaga ccaagcccca gcagcctgtc
601 agtgagcctg ctgcccctga acagcctgct cctgagccca agcaccctgc ccgggctcca
661 gctcgaggtg acagtgaaga taggaggggc ccgggtcaga agacaggccc tgacccagcc
721 tctgctcccg ggcgaggaaa ctatgggcct cccgtgcgca gggcctccga ggcacgaatg
781 agctcatcta gccgagattc agagagctgg gaccacagtg ggggtgctgg agactccagc
841 cggagcccag caggtttgag acgggccaac tcagtccagg cctccagacc tgccccaggc
901 tcggtgcaga gcccagcgcc acctcagcct gggcagccag ggaccccagg aggaagcaga
961 ccgggtcctg ggccagcagg acgctttcca gatcagaagc cagaggtggc tccgagcgac
1021 cctgggacca ctgccccacc ccgagaggag agaacagggg gagtcggggg ctacccagca
1081 gttggagcca gagaggaccg aatgagccac ccctccggac cctattccca agcatctgca
1141 gctgcccccc agcctgctgc agcccgccag ccaccacccc cagaggagga ggaagaggaa
1201 gccaacagct acgattcgga tgaagcaacc accctgggtg ccctggaatt cagccttctc
1261 tacgaccagg acaacagctc cctgcagtgc accatcatta aggccaaggg cctgaagccc
1321 atggattcaa acggcttggc tgatccctac gttaagctgc acctcctgcc gggagccagc
1381 aagtccaaca agcttcgtac aaaaactctg cggaataccc ggaaccccat ctggaatgag
1441 accctcgtgt atcacggcat caccgatgag gacatgcaaa ggaagaccct caggatctcc
1501 gtctgtgatg aggacaaatt tggccacaat gaatttattg gtgagaccag attctccctc
1561 aagaaactga agcccaacca gaggaagaat ttcaacatct gcctggagcg agtgattcct
1621 atgaaacgtg ctgggaccac cgggtcagcc cgaggcatgg ccctttatga ggaagagcag
1681 gtggagcgtg ttggtgacat cgaggagcgt ggcaagatcc tggtctccct catgtacagc
1741 acacagcagg gaggcctcat tgtgggcatc atacgctgcg tgcacctggc tgccatggac
1801 gctaatggct actcagaccc attcgtcaag ctctggctga aaccggacat gggaaagaag
1861 gccaaacaca agactcaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1921 aaaaaaaaaa aaaa
//