LOCUS BC009823 1009 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RAB, member RAS oncogene family-like 5, mRNA (cDNA
clone MGC:14964 IMAGE:3946565), complete cds.
ACCESSION BC009823
VERSION BC009823.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1009)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1009)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC009823.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: h Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 12232462.
FEATURES Location/Qualifiers
source 1..1009
/db_xref="H-InvDB:HIT000034597"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14964 IMAGE:3946565"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1009
/gene="RABL5"
/gene_synonym="DKFZp761N0823"
/gene_synonym="FLJ13225"
/gene_synonym="FLJ14117"
/db_xref="GeneID:64792"
/db_xref="HGNC:HGNC:21895"
CDS 88..645
/gene="RABL5"
/gene_synonym="DKFZp761N0823"
/gene_synonym="FLJ13225"
/gene_synonym="FLJ14117"
/codon_start=1
/product="RAB, member RAS oncogene family-like 5"
/protein_id="AAH09823.1"
/db_xref="GeneID:64792"
/db_xref="HGNC:HGNC:21895"
/translation="MLKAKILFVGPCESGKTVLANFLTESSDITEYSPTQGVRILEFE
NPHVTSNNKGTGCEFELWDCGGDAKFESCWPALMKDAHGVVIVFNADIPSHRKEMEMW
YSCFVQQPSLQDTQCMLIAHHKPGSGDDKGSLSLSPPLNKLKLVHSNLEDDPEEIRME
FIKYLKSIINSMSESRDREEMSIMT"
BASE COUNT 282 a 255 c 244 g 228 t
ORIGIN
1 ccatggaaac gaaagcggcc aagtagagct ccgtcctgac gcgccgcctc ccgtgggctc
61 cggccggcta agccgcggcg gacaactatg ctgaaagcca agatcctctt cgtggggcct
121 tgcgagagtg gaaaaactgt tttggccaac tttctgacag aatcttctga catcactgaa
181 tacagcccaa cccaaggagt gaggatccta gaatttgaga acccgcatgt taccagcaac
241 aacaaaggca cgggctgtga attcgagcta tgggactgtg gtggcgatgc taagtttgag
301 tcctgctggc cggccctgat gaaggatgct catggagtgg tgatcgtctt caatgctgac
361 atcccaagcc accggaagga aatggagatg tggtattcct gctttgtcca acagccgtcc
421 ttacaggaca cacagtgtat gctaattgca caccacaaac caggctctgg agatgataaa
481 ggaagcctgt ctttgtcgcc acccttgaac aagctgaagc tggtgcactc aaacctggaa
541 gatgaccctg aggagatccg gatggaattc ataaagtatt taaaaagcat aatcaactcc
601 atgtctgaga gcagagacag ggaggagatg tcaattatga cctagccagc cttcacctgg
661 gactgccaca tccccagtga aatcagcatg tttctcggtg cagatctgaa atcacatcca
721 gctcctgatg ttttcttctc cctctgactg cagaggaagt gttcctacct gcaggaaggc
781 acctgtcacg cagggcgttc actcagacca tctgtgctct gccctgagtt cagttgagaa
841 aatcctatta tcaaatttgg atttcctggc cccagaactt cccaaagacc tgtaaaatgg
901 agggatttac cacctcacat atgtccagtt aaacagtttg tggacttgta accgtcgcag
961 cccaatgata caacagtagt ttaatcacgt gaaaaaaaaa aaaaaaaaa
//