LOCUS BC009793 916 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens excision repair cross-complementing rodent repair deficiency, complementation group 8, mRNA (cDNA clone MGC:13580 IMAGE:3683434), complete cds. ACCESSION BC009793 VERSION BC009793.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 916) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 916) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 19 Row: a Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 55956771. FEATURES Location/Qualifiers source 1..916 /db_xref="H-InvDB:HIT000034582" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:13580 IMAGE:3683434" /tissue_type="Bladder, carcinoma" /clone_lib="NIH_MGC_53" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..916 /gene="ERCC8" /gene_synonym="CSA" /db_xref="GeneID:1161" /db_xref="HGNC:HGNC:3439" /db_xref="MIM:609412" CDS 48..665 /gene="ERCC8" /gene_synonym="CSA" /codon_start=1 /product="excision repair cross-complementing rodent repair deficiency, complementation group 8" /protein_id="AAH09793.1" /db_xref="GeneID:1161" /db_xref="HGNC:HGNC:3439" /db_xref="MIM:609412" /translation="MLGFLSARQTGLEDPLRLRRAESTRRVLGLELNKDRDVERIHGG GINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSV ETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVA VGTRGPKVQLCDLKSGSCSHILQGIFILFQTATTLSKRFNKKKRY" BASE COUNT 304 a 163 c 193 g 256 t ORIGIN 1 gggggtcatg gcgacgtcca gtgctccagc cggtgtgagg acacgatatg ctggggtttt 61 tgtccgcacg ccaaacgggt ttggaggacc ctcttcgcct tcggagagca gagtcaacac 121 ggagagtttt gggactggaa ttaaataaag acagagatgt tgaaagaatc cacggcggtg 181 gaattaacac ccttgacatt gaacctgttg aagggagata catgttatca ggtggttcag 241 atggtgtgat tgtactttat gaccttgaga actccagcag acaatcttat tacacatgta 301 aagcagtgtg ttccattggc agagatcatc ctgatgttca cagatacagt gtggagactg 361 tacagtggta tcctcatgac actggcatgt tcacatcaag ctcatttgat aaaactctga 421 aagtatggga tacaaataca ttacaaactg cagatgtatt taattttgag gaaacagttt 481 acagtcatca tatgtctcca gtctccacca agcactgttt ggtagcagtt ggtactagag 541 gacccaaagt acaactttgt gacttgaagt ctggatcctg ttctcacatt ctacagggta 601 tttttatttt atttcaaacg gcaactactt tgagtaaacg attcaataaa aagaaacgtt 661 actaacagtg tattctttgt aagtgacatg actaatgtac tttgtgctgg ttgttgagac 721 tcagcaggga aataaagatc cttctgtgca ttattcttat aaaactgaac cattgaaaac 781 acatttatat gaacaatgat cattggggaa gctcaaacaa tatgaaaaat agttctaact 841 caaaaccttg tgttatttct acattaaaaa aactaatgca actcagaaaa aaaaaaaaaa 901 aaaaaaaaaa aaaaaa //