LOCUS BC009781 1576 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ring finger protein 13, mRNA (cDNA clone MGC:13487
IMAGE:3683407), complete cds.
ACCESSION BC009781
VERSION BC009781.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1576)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1576)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: a Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34577092.
FEATURES Location/Qualifiers
source 1..1576
/db_xref="H-InvDB:HIT000034571"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13487 IMAGE:3683407"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1576
/gene="RNF13"
/gene_synonym="MGC13689"
/gene_synonym="RZF"
/db_xref="GeneID:11342"
/db_xref="HGNC:HGNC:10057"
/db_xref="MIM:609247"
CDS 160..1305
/gene="RNF13"
/gene_synonym="MGC13689"
/gene_synonym="RZF"
/codon_start=1
/product="ring finger protein 13"
/protein_id="AAH09781.1"
/db_xref="GeneID:11342"
/db_xref="HGNC:HGNC:10057"
/db_xref="MIM:609247"
/translation="MLLSIGMLMLSATQVYTILTVQLFAFLNLLPVEADILAYNFENA
SQTFDDLPARFGYRLPAEGLKGFLINSKPENACEPIVPPPVKDNSSGTFIVLIRRLDC
NFDIKVLNAQRAGYKAAIVHNVDSDDLISMGSNDIEVLKKIDIPSVFIGESSANSLKD
EFTYEKGGHLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRL
RKDQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK
TCPVCKQKVVPSQGDSDSDTDSSQEENEVTEHTPLLRPLASVSAQSFGALSESRSHQN
MTESSDYEEDDNEDTDSSDAENEINEHDVVVQLQPNGERDYNIANTV"
BASE COUNT 488 a 306 c 318 g 464 t
ORIGIN
1 gggggcctag gtgttgtcgt ccctgctagt actccgggct gtgggggtcg gtgcggatat
61 tcagtcatga aatcagggta gggacttctc ccgcagcgac gcggctggca agactgtttg
121 tgttgcgggg gccggacttc aaggtgattt tacaacgaga tgctgctctc catagggatg
181 ctcatgctgt cagccacaca agtctacacc atcttgactg tccagctctt tgcattctta
241 aacctactgc ctgtagaagc agacatttta gcatataact ttgaaaatgc atctcagaca
301 tttgatgacc tccctgcaag atttggttat agacttccag ctgaaggttt aaagggtttt
361 ttgattaact caaaaccaga gaatgcctgt gaacccatag tgcctccacc agtaaaagac
421 aattcatctg gcactttcat cgtgttaatt agaagacttg attgtaattt tgatataaag
481 gttttaaatg cacagagagc aggatacaag gcagccatag ttcacaatgt tgattctgat
541 gacctcatta gcatgggatc caacgacatt gaggtactaa agaaaattga cattccatct
601 gtctttattg gtgaatcatc agctaattct ctgaaagatg aattcacata tgaaaaaggg
661 ggccacctta tcttagttcc agaatttagt cttcctttgg aatactacct aattcccttc
721 cttatcatag tgggcatctg tctcatcttg atagtcattt tcatgatcac aaaatttgtc
781 caggatagac atagagctag aagaaacaga cttcgtaaag atcaacttaa gaaacttcct
841 gtacataaat tcaagaaagg agatgagtat gatgtatgtg ccatttgttt ggatgagtat
901 gaagatggag acaaactcag aatccttccc tgttcccatg cttatcattg caagtgtgta
961 gacccttggc taactaaaac caaaaaaacc tgtccagtgt gcaagcaaaa agttgttcct
1021 tctcaaggcg attcagactc tgacacagac agtagtcaag aagaaaatga agtgacagaa
1081 catacccctt tactgagacc tttagcttct gtcagtgccc agtcatttgg ggctttatcg
1141 gaatcccgct cacatcagaa catgacagaa tcttcagact atgaggaaga cgacaatgaa
1201 gatactgaca gtagtgatgc agaaaatgaa attaatgaac atgatgtcgt ggtccagttg
1261 cagcctaatg gtgaacggga ttacaacata gcaaatactg tttgactttc agaagatgat
1321 tggtttattt ccctttaaaa tgattaggta tatactgtaa tttgattttt tgctcccttc
1381 aaagatttct gtagaaataa cttatttttt agtattctac agtttaatca aattactgaa
1441 acaggacttt tgatctggta tttatctgcc aagaatatac ttcattcact aataatagac
1501 tggtgctgta actcaagcat caattcagct cttcttttgg aatgaaagta tagccaaaaa
1561 aaaaaaaaaa aaaaaa
//