LOCUS BC009752 3306 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens sex comb on midleg homolog 1 (Drosophila), mRNA (cDNA
clone MGC:1108 IMAGE:3010273), complete cds.
ACCESSION BC009752
VERSION BC009752.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3306)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3306)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC009752.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: f Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6912641.
FEATURES Location/Qualifiers
source 1..3306
/db_xref="H-InvDB:HIT000034551"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1108 IMAGE:3010273"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3306
/gene="SCMH1"
/gene_synonym="Scml3"
/db_xref="GeneID:22955"
/db_xref="HGNC:HGNC:19003"
CDS 312..2294
/gene="SCMH1"
/gene_synonym="Scml3"
/codon_start=1
/product="sex comb on midleg homolog 1 (Drosophila)"
/protein_id="AAH09752.1"
/db_xref="GeneID:22955"
/db_xref="HGNC:HGNC:19003"
/translation="MLVCYSVLACEILWDLPCSIMGSPLGHFTWDKYLKETCSVPAPV
HCFKQSYTPPSNEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFW
RLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPIRIFHKEPP
SPSHNFFKMGMKLEAVDRKNPHFICPATIGEVRGSEVLVTFDGWRGAFDYWCRFDSRD
IFPVGWCSLTGDNLQPPGTKVVIPKNPYPASDVNTEKPSIHSSTKTVLEHQPGQRGRK
PGKKRGRTPKTLISHPISAPSKTAEPLKFPKKRGPKPGSKRKPRTLLNPPPASPTTST
PEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARASV
VLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFL
EKLCHNLRSDNLFGNQPFTQTHLSLTAIEYSHSHDRYLPGETFVLGNSLARSLEPHSD
SMDSASNPTNLVSTSQRHRPLLSSCGLPPSTASAVRRLCSRGVLKGSNERRDMESFWK
LNRSPGSDRYLESRDASRLSGRDPSSWTVEDVMQFVREADPQLGPHADLFRKHEIDGK
ALLLLRSDMMMKYMGLKLGPALKLSYHIDRLKQGKF"
BASE COUNT 832 a 932 c 789 g 753 t
ORIGIN
1 ccaatatcaa gaagctgctg acatcctgga tctagggttg taaagaagat tacatgagct
61 aatggatgtg aaaacatctt aaaaactctc aaatactttt caactttgga ggattattat
121 gattttcatt ctgttcagcg gctatactca gactttactc taaaagtcaa atcttctgac
181 attctttgaa gtgaagcatt ctatgaatgt gagctgaaga aatgaatgaa atgaaataat
241 gcagcatcta gtgctttttg catggcccaa aggggctctg tgctgctcca ctacagagga
301 aacttcaaga aatgctggtt tgctacagtg ttttagcttg tgagattctc tgggaccttc
361 cctgctccat catggggtca cctctaggtc attttacctg ggacaaatac ctaaaagaaa
421 catgttcagt cccagcgcct gtccattgct tcaagcagtc ctacacacct ccaagcaacg
481 agttcaagat cagtatgaaa ttggaagcac aggaccccag gaacaccaca tccacctgta
541 ttgccacagt agttggactg acaggtgccc gccttcgcct gcgccttgat gggagcgaca
601 acaaaaatga cttctggcgg ctggttgact cagctgaaat ccagcctatt gggaactgtg
661 aaaagaatgg gggtatgcta cagccacctc ttggatttcg gctgaatgcg tcttcttggc
721 ccatgttcct tttgaagacg ctaaatggag cagagatggc tcccatcagg attttccaca
781 aggagccacc atcgccttcc cacaacttct tcaaaatggg aatgaagcta gaagctgtgg
841 acaggaagaa ccctcatttc atttgcccag ccactattgg ggaggttcgg ggctcagagg
901 tgcttgtcac ttttgatggg tggcgagggg cctttgacta ctggtgccgc ttcgactccc
961 gagacatctt ccctgtgggc tggtgttcct tgactggaga caacctgcag cctcctggca
1021 ccaaagttgt gattccaaag aatccctatc ctgcctccga tgtgaatact gagaagccca
1081 gcatccacag cagcaccaaa actgtcttgg aacatcaacc agggcagagg gggcgtaaac
1141 caggaaagaa gcggggccgg acacccaaga ccctaatttc ccatcccatc tctgccccat
1201 ccaagacagc tgaacctttg aaattcccaa agaagagagg tcccaaacct ggcagcaaga
1261 ggaaacctcg gactttgctg aacccaccac ctgcctcacc aacaaccagc actcctgaac
1321 cggataccag cactgtaccc caggatgctg ccaccatccc cagctcagcc atgcaggccc
1381 caacagtttg tatctacttg aacaagaatg gcagcacagg cccccactta gataagaaga
1441 aggtccagca actccctgac cattttggac cagcccgtgc ctctgtggtg ttgcagcagg
1501 ctgtccaggc ctgtatcgac tgtgcttatc accagaaaac cgtcttcagc ttcctcaagc
1561 aaggccatgg tggtgaggtt atctcagccg tgtttgaccg ggaacagcat accctcaacc
1621 tcccagcagt caacagcatc acctacgtcc tccgcttcct ggagaaactc tgccacaacc
1681 ttcgtagtga caatctgttt ggcaaccagc cctttacaca gactcacttg tcactcactg
1741 ccatagagta cagccacagc cacgacaggt acctaccagg tgaaaccttt gtcctgggga
1801 atagtctggc ccgctccttg gaaccacact cagactcaat ggactctgcc tcaaatccca
1861 ccaaccttgt cagcacctcc caaaggcacc ggcccttgct ttcatcctgt ggcctcccac
1921 caagcactgc ctcagctgtg cgcaggctat gctccagggg agtgttaaaa ggatcaaatg
1981 aaagaaggga tatggaatca ttttggaaac taaatcgttc cccagggtcg gaccgatacc
2041 tggagagccg cgatgcctct cgactgagtg gccgggaccc ctcctcatgg acagtcgagg
2101 atgtgatgca gtttgtccgg gaagctgatc ctcagcttgg accccacgct gacctgtttc
2161 gcaaacacga gatcgatggc aaggccctgc tgctgctgcg cagtgacatg atgatgaagt
2221 acatgggcct gaagctgggg cctgcactca agctctccta ccacattgac cggctgaagc
2281 agggcaagtt ctgaaccagg agaggcagcc tagacaacca agtggcagca ggtgggggca
2341 ttcttctagg aatgaggggc atcagcccac cccaggcacc tcagtggggt tccgggccac
2401 ctcaggactc taagaggctg tgtggagcca ccactcctag ccacagctgc catgataagt
2461 ccttccatga aggactgagg agggagagtg ggggtccagg gctggtgctg ctcttccctc
2521 agctctgccg gggctctaag gtccctctat ttatttctca accctggctg gcctctcacc
2581 aggagtttag gctgaatgcc ttccacgtga tggaggaaaa ggccaactct gtcctggtct
2641 tgctgtggca ccccatcgcc ccacagctcg taccttctca ccagattccc ctgaatccaa
2701 actcgtggtg caaacctcta ccttttttac aaaaagatct tattgttaat ttattgtttc
2761 tggcacttgg gcaaaccctg tagttaatac tcctcccaca ctagacactg ggtttcagga
2821 ggagggagac tgccctgctt tggtcccaga gaggccctct gcagataggc gtggcccctc
2881 ttcagaggac actaccctag ggcactttct ctttgaggtg gagagaccca taaagccttg
2941 accacatcac tccatatggg gaggagaagg atccctgtca ccttctcctc tcttcacggg
3001 gcccttttgc agccctaggc ctcatctgtg ggaagggagt ccctggctca tactgccccc
3061 accacagctc cttgccctgg ccagaactgc tgtcgaagaa aatcaggccg gaaggccaag
3121 aaggcgctaa gggggatggg agggcaggtt ttccaggctg gagtcggttc cacccactcg
3181 cctgtccaca ggcttccttg taagcaagtc agcagcacag ctactcacgc tgccatctgg
3241 acttatttta tgtcaatctg tttataaata aaaaccaata tagataaaaa aaaaaaaaaa
3301 aaaaaa
//