LOCUS BC009750 2619 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens chromosome 20 open reading frame 54, mRNA (cDNA clone
MGC:10698 IMAGE:3689286), complete cds.
ACCESSION BC009750
VERSION BC009750.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2619)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2619)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC009750.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: i Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147463.
FEATURES Location/Qualifiers
source 1..2619
/db_xref="H-InvDB:HIT000034549"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10698 IMAGE:3689286"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2619
/gene="C20orf54"
/gene_synonym="bA371L19.1"
/gene_synonym="MGC10698"
/db_xref="GeneID:113278"
/db_xref="HGNC:HGNC:16187"
CDS 243..1652
/gene="C20orf54"
/gene_synonym="bA371L19.1"
/gene_synonym="MGC10698"
/codon_start=1
/product="chromosome 20 open reading frame 54"
/protein_id="AAH09750.2"
/db_xref="GeneID:113278"
/db_xref="HGNC:HGNC:16187"
/translation="MAFLMHLLVCVFGMGSWVTINGLWVELPLLVMELPEGWYLPSYL
TVVIQLANIGPLLVTLLHHFRPSCLSEVPIIFTLLGVGTVTCIIFAFLWNMTSWVLDG
HHSIAFLVLTFFLALVDCTSSVTFLPFMSRLPTYYLTTFFVGEGLSGLLPALVALAQG
SGLTTCVNVTEISDSVPSPVPTRETDIAQGVPRALVSALPGMEAPLSHLESRYLPAHF
SPLVFFLLLSIMMACCLVAFFVLQRQPRCWEASVEDLLNDQVTLHSIRLREENDLGPA
GMVDSSQGQGYLEEKAAPCCPAHLAFVYTLVAFVNALTNGMLPSVQTYSCLSYGPVAY
HLAATLSIVANPLASLVSMFLPNRSLLFLGVLSVLGTCFGGYNMAMAVMSPCPLLQGH
WGGEVLIVASWVLFSGCLSYVKVMLGVVLRDLSRSALLWCGAAVQLGSLLGALLMFPL
VNVLRLFSSADFCNLHCPA"
BASE COUNT 507 a 813 c 710 g 589 t
ORIGIN
1 actagaagga agaagtatgg agttaaagac tgcagcgtga actgaggagt cccggacagg
61 ccgcttgctg cagaggatcc agtccagatc ccaggagagc ccctctgccc cttcggacct
121 cgtctcccat ctacaaaacg tgaagattgg cccagttggc gtgtctctac aaaaaggtgc
181 atataccact gccccgctgc aggctgatct gagaaagcct ctggcccagg gcagataccg
241 ccatggcctt cctgatgcac ctgctggtct gcgtcttcgg aatgggctcc tgggtgacca
301 tcaatgggct ctgggtagag ctgcccctgc tggtgatgga gctgcccgag ggctggtacc
361 tgccctccta cctcacggtg gtcatccagc tggccaacat cgggcccctc ctggtcaccc
421 tgctccatca cttccggccc agctgccttt ccgaagtgcc catcatcttc accctgctgg
481 gcgtgggaac cgtcacctgc atcatctttg ccttcctctg gaatatgacc tcctgggtgc
541 tggacggcca ccacagcatc gctttcttgg tcctcacctt cttcctggcc ctggtggact
601 gcacctcttc agtgaccttc ctgccgttca tgagccggct gcccacctac tacctcacca
661 ccttctttgt gggtgaagga ctcagcggcc tcttgcccgc cctggtggct cttgcccagg
721 gctccggtct cactacctgc gtcaatgtca ctgagatatc agacagcgta ccaagccctg
781 tacccacgag ggagactgac atcgcacagg gagttcccag agctttggtg tccgccctcc
841 ccggaatgga agcacccttg tcccacctgg agagccgcta ccttcccgcc cacttctcac
901 ccctggtctt cttcctcctc ctatccatca tgatggcctg ctgcctcgtg gcgttctttg
961 tcctccagcg tcaacccagg tgctgggagg cttccgtgga agacctcctc aatgaccagg
1021 tcaccctcca ctccatccgg ctgcgggaag agaatgactt gggccctgca ggcatggtgg
1081 acagcagcca gggccagggg tatctagagg agaaagcagc cccctgctgc ccggcgcacc
1141 tggccttcgt ctataccctg gtggccttcg tcaacgcgct caccaacggc atgctgccct
1201 ctgtgcagac ctactcctgc ctgtcctatg ggccagttgc ctaccacctg gctgccaccc
1261 tcagcattgt ggccaaccct cttgcctcgt tggtctccat gttcctgcct aacaggtctc
1321 tgctgttcct gggggtcctc tccgtgcttg ggacctgctt tgggggctac aacatggcca
1381 tggcggtgat gagcccctgc cccctcttgc agggccactg gggtggggaa gtcctcattg
1441 tggcctcgtg ggtgcttttc agcggctgcc tcagctacgt caaggtgatg ctgggcgtgg
1501 tcctgcgcga cctcagccgc agcgccctct tgtggtgcgg ggcggcggtg cagctgggct
1561 cgctgctcgg agcgctgctc atgttccctc tggtcaacgt gctgcggctc ttctcgtccg
1621 cggacttctg caatctgcac tgtccagcct aggcaggccg ccgaccccgc ccccatcgct
1681 cacggacgga actggggtcc agagaggcca ggtcacagag caaggggcag gaacagagag
1741 acagagcctg agtaattgaa tcatgaacgc aagtgcccac tggggactgt ggggaagatg
1801 gcacctggaa atgcaaggtg cggctctatc cccaactctg tgtcacacta cctgtgacga
1861 ccagctcaga tctcctttgc tttgactctc aagagaggac tgatttgcag catctagctg
1921 gaggcaggcc caagggtgtt agaagggaaa cagctgggac agccggctgt cccttcaggc
1981 tgtgtgacct tgggaaagtc atttggcttc tctgtgcctg tttcttcatg catgcagtgg
2041 ggattccagt aagtaccaac tacctcacag gcatggcacg gaggcaaaag gaaaaagcag
2101 cccgcatcaa gcaagccctc ctgggccacc tgctgatctg acagtccatc gtagtaacaa
2161 gagtggcagt ctgcacaacc tagaagtggc cagaagggtt gagacacgcc cctgccctct
2221 ctcctttgcc cctcagtctc acagaggggc ttctacaaga caagcagata acgatagaat
2281 cttgggcatc ttggctttcg gattctcagt gtggagggac gtagtacccc acacacccct
2341 tcctgtcatc cttcctggcc cataaagccc actagttgga gagtaagtac cctcctggaa
2401 gcagggagag atgatttgct ggtggggctg gggaaggccc atccctgagc ctctgaaagt
2461 gaactccccg accaggttgg ggaccagaca tgcagagccc ctggaagtat tctctcaaat
2521 ggaggcaaca gaggtgattg ttattttgtt ttagtttctg tttttcattt ttttaaataa
2581 aggcattccc tgcttttaaa aaaaaaaaaa aaaaaaaaa
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