LOCUS BC009732 1128 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens Na+/H+ exchanger domain containing 2, mRNA (cDNA clone
IMAGE:3877337), partial cds.
ACCESSION BC009732
VERSION BC009732.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1128)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1128)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: b Column: 20.
FEATURES Location/Qualifiers
source 1..1128
/db_xref="H-InvDB:HIT000087371"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3877337"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1128
/gene="NHEDC2"
/db_xref="GeneID:133308"
/db_xref="HGNC:HGNC:25143"
CDS <1..1065
/gene="NHEDC2"
/codon_start=1
/product="NHEDC2 protein"
/protein_id="AAH09732.1"
/db_xref="GeneID:133308"
/db_xref="HGNC:HGNC:25143"
/translation="VWSITGSECLPGGNLFGIIILFYCAIIGGKLLGLIKLPTLPPLP
SLLGMLLAGFLIRNIPVINDNVQIKHKWSSSLRSIALSIILVRAGLGLDSKALKKLKG
VCVRLSMGPCIVEACTSALLAHYLLGLPWQWGFILGFVLGAVSPAVVVPSMLLLQGGG
YGVEKGVPTLLMAAGSFDDILAITGFNTCLGIAFSTGSTVFNVLRGVLEVVIGVATGS
VLGFFIQYFPSRDQDKLVCKRTFLVLGLSVLAVFSSVHFGFPGSGGLCTLVMAFLAGM
GWTSEKAEVEKIIAVAWDIFQPLLFGLIGAEVSIASLRPETVGSADSITGNFGTERPK
LLGPPSTQLRFHFFHIQLST"
BASE COUNT 263 a 237 c 276 g 352 t
ORIGIN
1 gtttggtcaa ttactggcag tgaatgtctt cctggaggaa acctatttgg aattataatc
61 ctattctatt gtgccatcat tggtggtaaa cttttggggc ttattaagtt acctacattg
121 cctccactgc cttctcttct tggcatgctg cttgcagggt ttctcatcag aaatatccca
181 gtcatcaacg ataatgtgca gatcaagcac aagtggtctt cctctttgag aagcatagcc
241 ctgtctatca ttctggttcg tgctggcctt ggtctggatt caaaggccct gaagaagtta
301 aagggcgttt gtgtaagact gtccatgggt ccctgtattg tggaggcgtg cacatctgct
361 cttcttgccc attacctgct gggtttacca tggcaatggg gatttatact gggttttgtt
421 ttaggtgctg tatctccagc tgttgtggtg ccttcaatgc tccttttgca gggaggaggc
481 tatggtgttg agaagggtgt cccaaccttg ctcatggcag ctggcagctt cgatgacatt
541 ctggccatca ctggcttcaa cacatgcttg ggcatagcct tttccacagg ctctactgtc
601 tttaatgtcc tcagaggagt tttggaggtg gtaattggtg tggcaactgg atctgttctt
661 ggatttttca ttcagtactt tccaagccgt gaccaggaca aacttgtgtg taagagaaca
721 ttccttgtgt tggggttgtc tgtgctagct gtgttcagca gtgtgcattt tggtttccct
781 ggatcaggag gactgtgcac gttggtcatg gctttccttg caggcatggg atggaccagc
841 gaaaaggcag aggttgaaaa gataattgca gttgcctggg acatttttca gccccttctt
901 tttggactaa ttggagcaga ggtatctatt gcatctctca gaccagaaac tgtaggaagc
961 gcggattcta ttactggaaa ctttgggact gaaaggccaa agcttctggg cccaccatca
1021 acgcagctcc gctttcattt ctttcacata caactttcca cataagattt catgcggaaa
1081 aaaaaaaaaa actcacaaag gttttatact gataaaaaaa aaaaaaaa
//