LOCUS BC009713 875 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens syntaxin 8, mRNA (cDNA clone MGC:9427 IMAGE:3899766),
complete cds.
ACCESSION BC009713
VERSION BC009713.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 875)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 875)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: l Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4759187.
FEATURES Location/Qualifiers
source 1..875
/db_xref="H-InvDB:HIT000034525"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9427 IMAGE:3899766"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..875
/gene="STX8"
/gene_synonym="CARB"
/db_xref="GeneID:9482"
/db_xref="HGNC:HGNC:11443"
/db_xref="MIM:604203"
CDS 24..734
/gene="STX8"
/gene_synonym="CARB"
/codon_start=1
/product="syntaxin 8"
/protein_id="AAH09713.1"
/db_xref="GeneID:9482"
/db_xref="HGNC:HGNC:11443"
/db_xref="MIM:604203"
/translation="MAPDPWFSTYDSTCQIAQEIAEKIQQRNQYERKGEKAPKLTVTI
RALLQNLKEKIALLKDLLLRAVSTHQITQLEGDRRQNLLDDLVTRERLLLASFKNEGA
EPDLIRSSLMSEEAKRGAPNPWLFEEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSS
IISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRNETRRVNMVDRKSASCGMIM
VILLLLVAIVVVAVWPTN"
BASE COUNT 298 a 189 c 211 g 177 t
ORIGIN
1 gagcggcggg cggagtctgc aggatggcac cggacccctg gttctccaca tacgattcta
61 cttgtcaaat tgcccaagaa attgctgaga aaattcaaca acgaaatcaa tatgaacgaa
121 aaggtgaaaa ggcaccaaag cttaccgtga caatcagagc tttgttgcag aacctgaagg
181 aaaagatcgc ccttttgaag gacttattgc taagagctgt gtcaacacat cagataacac
241 agcttgaagg ggaccgaaga cagaacctct tggatgatct tgtaactcga gagagactac
301 ttctggcatc ctttaagaat gagggtgccg aaccagatct aatcaggtcc agcctgatga
361 gtgaagaggc taagcgagga gcacccaacc cttggctctt tgaggagcca gaggagacca
421 gaggcttggg ttttgatgaa atccggcaac agcagcagaa aattatccaa gaacaggatg
481 caggccttga tgccctttcc tctatcataa gtcgccaaaa acaaatgggg caggaaattg
541 ggaatgaatt ggatgaacaa aatgagataa ttgacgacct tgccaaccta gtggagaaca
601 cagatgaaaa acttcgcaat gaaaccaggc gggtaaacat ggtggacaga aagtcagcct
661 cttgtgggat gatcatggtg attttactgc tgcttgtggc tatcgtggtt gttgcagtct
721 ggccgaccaa ctgatggcag taaagagacc accagcagtg acacctgcca atgacagatg
781 caagcccaac acccttttgg tacgcaaaac ctgctctcaa taaattcccc caaagctctg
841 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//