LOCUS BC009701 1626 bp mRNA linear HUM 03-OCT-2003 DEFINITION Homo sapiens peptidyl arginine deiminase, type II, mRNA (cDNA clone MGC:9250 IMAGE:3901790), complete cds. ACCESSION BC009701 VERSION BC009701.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1626) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1626) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (29-JUN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 14 Row: o Column: 10 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 15042936. FEATURES Location/Qualifiers source 1..1626 /db_xref="H-InvDB:HIT000034515" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:9250 IMAGE:3901790" /tissue_type="Pancreas, epithelioid carcinoma" /clone_lib="NIH_MGC_70" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1626 /gene="PADI2" /gene_synonym="KIAA0994" /gene_synonym="PDI2" /db_xref="GeneID:11240" /db_xref="MIM:607935" CDS 65..1378 /gene="PADI2" /gene_synonym="KIAA0994" /gene_synonym="PDI2" /codon_start=1 /product="PADI2 protein" /protein_id="AAH09701.1" /db_xref="GeneID:11240" /db_xref="MIM:607935" /translation="MLRERTVRLQYGSRVEAVYVLGTYLWTDVYSAAPAGAQTFSLKH SEHVWVEVVRDGEAEEVATNGKQRWLLSPSTTLRVTMSQASTEASSDKVTVNYYDEEG SIPIDQAGLFLTAIEISLDVDADRDGVVEKNNPKKASWTWGPEGQGAILLVNCDRETP WLPKEDCRDEKVYSKEDLKDMSQMILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVE NPFFGQRYIHILGRRKLYHVVKYTGGSAELLFFVEGLCFPDEGFSGLVSIHVSLLEYM AQDIPLTPIFTDTVIFRIAPWIMTPNILPPVSVFVCCMKDNYLFLKEVKNLVEKTNCE LKVCFQYLNRGDRWIQDEIEFGYIEAPHKGFPVVLDSPRDGNLKDFPVKELLGPDFGY VTREPLFESVTSLDSFGNLEVSPPVTVNGKTYPLGRILIGSSFPL" misc_feature 65..1375 /gene="PADI2" /gene_synonym="KIAA0994" /gene_synonym="PDI2" /note="PAD; Region: Protein-arginine deiminase (PAD). Members of this family are found in mammals. In the presence of calcium ions, PAD enzymes EC:3.5.3.15 catalyse the post-translational modification reaction responsible for the formation of citrulline residues: Protein L-arginine + H2O <=> Protein L-citrulline + NH3. Several types are recognized (and included in the family) on the basis of molecular mass, substrate specificity, and tissue localization. The expression of type I PAD is known to be under the control of oestrogen" /db_xref="CDD:pfam03068" BASE COUNT 359 a 456 c 481 g 330 t ORIGIN 1 cgcacctgct gcaggtgctc ccggccgccc cggaccagcg agcgcgggca ctgcggcggg 61 gaggatgctg cgcgagcgga ccgtgcggct gcagtacggg agccgcgtgg aggcggtgta 121 cgtgctgggc acctacctct ggaccgatgt ctacagcgcg gccccagccg gggcccaaac 181 cttcagcctg aagcactcgg aacacgtgtg ggtggaggtg gtgcgtgatg gggaggctga 241 ggaggtggcc accaatggca agcagcgctg gcttctctcg cccagcacca ccctgcgggt 301 caccatgagc caggcgagca ccgaggccag cagtgacaag gtcaccgtca actactatga 361 cgaggaaggg agcattccca tcgaccaggc ggggctcttc ctcacagcca ttgagatctc 421 cctggatgtg gacgcagacc gggatggtgt ggtggagaag aacaacccaa agaaggcatc 481 ctggacctgg ggccccgagg gccagggggc catcctgctg gtgaactgtg accgagagac 541 accctggttg cccaaggagg actgccgtga tgagaaggtc tacagcaagg aagatctcaa 601 ggacatgtcc cagatgatcc tgcggaccaa aggccccgac cgcctccccg ccggatacga 661 gatagttctg tacatttcca tgtcagactc agacaaagtg ggcgtgttct acgtggagaa 721 cccgttcttc ggccaacgct atatccacat cctgggccgg cggaagctct accatgtggt 781 caagtacacg ggtggctccg cggagctgct gttcttcgtg gaaggcctct gtttccccga 841 cgagggcttc tcaggcctgg tctccatcca tgtcagcctg ctggagtaca tggcccagga 901 cattcccctg actcccatct tcacggacac cgtgatattc cggattgctc cgtggatcat 961 gacccccaac atcctgcctc ccgtgtcggt gtttgtgtgc tgcatgaagg ataattacct 1021 gttcctgaaa gaggtgaaga accttgtgga gaaaaccaac tgtgagctga aggtctgctt 1081 ccagtaccta aaccgaggcg atcgctggat ccaggatgaa attgagtttg gctacatcga 1141 ggccccccat aaaggcttcc ccgtggtgct ggactctccc cgagatggaa acctaaagga 1201 cttccctgtg aaggagctcc tgggcccaga ttttggctac gtgacccggg agcccctctt 1261 tgagtctgtc accagccttg actcatttgg aaacctggag gtcagtcccc cagtgaccgt 1321 gaatggcaag acatacccgc ttggccgcat cctcatcggg agcagctttc ctctgtaaga 1381 gaagccaggc tggggctagg ggctgtggga gtggggaagt cactgtttct cttttggggt 1441 ggcctgggtt gctcacacat ggagcaagtg gctgggggaa ttattccctc ccacgacttc 1501 ctgttaagag gccgacactc ttggaaagaa aatcaagcta gcctttatat ctttgtgtga 1561 tttaggatct aatatataac taaataaaca actcttttcc ccaagtgaaa aaaaaaaaaa 1621 aaaaaa //