LOCUS BC009642 1271 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens FXYD domain containing ion transport regulator 5, mRNA
(cDNA clone MGC:17850 IMAGE:3900880), complete cds.
ACCESSION BC009642
VERSION BC009642.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1271)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1271)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC009642.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: n Column: 19.
FEATURES Location/Qualifiers
source 1..1271
/db_xref="H-InvDB:HIT000034483"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17850 IMAGE:3900880"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1271
/gene="FXYD5"
/gene_synonym="dysad"
/gene_synonym="HSPC113"
/gene_synonym="IWU-1"
/gene_synonym="IWU1"
/gene_synonym="KCT1"
/gene_synonym="OIT2"
/gene_synonym="PRO6241"
/gene_synonym="RIC"
/db_xref="GeneID:53827"
/db_xref="HGNC:HGNC:4029"
/db_xref="MIM:606669"
CDS 448..984
/gene="FXYD5"
/gene_synonym="dysad"
/gene_synonym="HSPC113"
/gene_synonym="IWU-1"
/gene_synonym="IWU1"
/gene_synonym="KCT1"
/gene_synonym="OIT2"
/gene_synonym="PRO6241"
/gene_synonym="RIC"
/codon_start=1
/product="FXYD domain containing ion transport regulator
5"
/protein_id="AAH09642.1"
/db_xref="GeneID:53827"
/db_xref="HGNC:HGNC:4029"
/db_xref="MIM:606669"
/translation="MSPSGRLCLLTIVGLILPTRGQTLKDTTSSSSADSTIMDIQVPT
RAPDAVYTELQPTSPTPTWPADETPQPQTQTQQLEGTDGPLVTDPETHKSTKAAHPTD
DTTTLSERPSPSTDVQTDPQTLKPSGFHEDDPFFYDEHTLRKRGLLVAAVLFITGIII
LTSGKCRQLSRLCRNHCR"
BASE COUNT 286 a 421 c 320 g 244 t
ORIGIN
1 cgttactcac tcttcctcct tcccctcctc gccgactccc gggctctggg cccctggggg
61 agggaagagg cctcctatct actcctctgc cccagtcccc tccttgcgtc agtcccagtg
121 agggataagc gcctggcgga aggcgcaggg aggtgtttct ctgcttcagg agtgcccgcc
181 ggcccttgca gctgctggaa gacccattta tctcatgctt cttgttttct ttggggacct
241 gcaggggaag gaagcagggt gacggtttgg tatccccacc taagaccctc ccctttcccc
301 tgaggccagc cgtcagcccc tggcaggggg tcttggaagc cagaggtttt tgctcagggc
361 agggaaaggg ctgcaggatc cccgggggct gccggaggtc ggtctcactg acatcatggc
421 tgaccccagc atcgcctggt cccacagatg tcgccctctg gtcgcctgtg tcttcttacc
481 atcgttggcc tgattctccc caccagagga cagacgttga aagataccac gtccagttct
541 tcagcagact caactatcat ggacattcag gtcccgacac gagccccaga tgcagtctac
601 acagaactcc agcccacctc tccaacccca acctggcctg ctgatgaaac accacaaccc
661 cagacccaga cccagcaact ggaaggaacg gatgggcctc tagtgacaga tccagagaca
721 cacaagagca ccaaagcagc tcatcccact gatgacacca cgacgctctc tgagagacca
781 tccccaagca cagacgtcca gacagacccc cagaccctca agccatctgg ttttcatgag
841 gatgacccct tcttctatga tgaacacacc ctccggaaac gggggctgtt ggtcgcagct
901 gtgctgttca tcacaggcat catcatcctc accagtggca agtgcaggca gctgtcccgg
961 ttatgccgga atcattgcag gtgagtccat cagaaacagg agctgacaac ccgctgggca
1021 cccgaagacc aagccccctg ccagctcacc gtgcccagcc tcctgcatcc cctcgaagag
1081 cctggccaga gagggaagac acagatgatg aagctggagc cagggctgcc ggtccgagtc
1141 tcctacctcc cccaaccctg cccgcccctg aaggctacct ggcgccttgg gggctgtccc
1201 tcaagttatc tcctctgtta agacaaaaag taaagcactg tggtctttga aaaaaaaaaa
1261 aaaaaaaaaa a
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