LOCUS BC009622 1390 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens small nuclear ribonucleoprotein 35kDa (U11/U12), mRNA
(cDNA clone MGC:17036 IMAGE:3893396), complete cds.
ACCESSION BC009622
VERSION BC009622.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1390)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1390)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: g Column: 10.
FEATURES Location/Qualifiers
source 1..1390
/db_xref="H-InvDB:HIT000087337"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17036 IMAGE:3893396"
/tissue_type="Lung, carcinoma, large cell
undifferentiated."
/clone_lib="NIH_MGC_69"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1390
/gene="SNRNP35"
/gene_synonym="HM-1"
/gene_synonym="U1SNRNPBP"
/db_xref="GeneID:11066"
/db_xref="HGNC:HGNC:30852"
CDS 512..1267
/gene="SNRNP35"
/gene_synonym="HM-1"
/gene_synonym="U1SNRNPBP"
/codon_start=1
/product="small nuclear ribonucleoprotein 35kDa (U11/U12)"
/protein_id="AAH09622.1"
/db_xref="GeneID:11066"
/db_xref="HGNC:HGNC:30852"
/translation="MKPANMNDWMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARY
VPNKGVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFI
EYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQLRF
GGRDRPFRKPINLPVVKNDLYREGKRERRERSRSRERHWDSRTRDRDHDRGREKRWQE
REPTRVWPDNDWERERDFRDDRIKGREKKERGK"
BASE COUNT 429 a 273 c 401 g 287 t
ORIGIN
1 ggccaaaaat tttctaaatt tgtataataa tttataattg taatgcattt ttatagacac
61 catatgatct aatcttcaca aaaacctagt gaagtgacat ttagctacat ttcacaataa
121 gaatcctgaa gctcaaaatt tactgacctc aaataatccc agcactttgg gaggctgagg
181 caggcgggtc atctgacatc aggagtttga gaccagcttg gccaacatgg tgaaatcctg
241 tctgtactag aaatgcaaaa attagctggg cgtggtggtg tgtgtctgtg atcccagcta
301 ctcgggaggc tgaggcggga gaatcgcttg aacctgggag gcggaggttg cagtgagccg
361 agattggcca ttgcactcca gcctgggtga cagagtgaga ctttgtctcg agtaaaaaaa
421 gagaatgtaa aaatcgaaag agattgttgt aggaaatctc aacctaatgc tgccggggag
481 gaagtgcacc tagaaagatt aatgagaaac aatgaaacca gctaacatga acgattggat
541 gcccatcgcc aaggagtatg atccactcaa agcgggcagc attgatggca ccgatgaaga
601 cccacacgac cgcgcggtct ggagggcaat gctggcacga tatgtcccca acaaaggtgt
661 cataggagat cccctcctca ccctgtttgt ggccagacta aacttgcaga ccaaggagga
721 caaattaaag gaagtctttt cccgctatgg tgacatccgg cggcttcggc tggtcaggga
781 cttggtcaca ggtttttcaa agggctacgc cttcatcgaa tacaaggagg agcgtgccgt
841 gatcaaagct taccgagatg ctgatggcct ggttattgac cagcatgaga tatttgtgga
901 ctacgagctg gaaaggactc tcaaagggtg gatccctcgg cgacttggag gcggtcttgg
961 gggaaaaaag gagtctgggc aactgagatt tgggggacgg gaccggcctt ttcgaaaacc
1021 tattaacttg ccagttgtta aaaacgacct ctatagagag ggaaaacggg aaaggcggga
1081 gcgatctcga tcccgagaaa gacactggga ctcgaggaca agggatcgag accatgacag
1141 gggccgggag aagagatggc aagaaagaga gccgaccagg gtgtggcccg acaatgactg
1201 ggagagagag agggacttca gagatgacag gatcaagggg agggagaaga aggaaagagg
1261 caagtagagg cccaacagca gaaccccaaa gtgaagttac agtggaaatg agtggagggg
1321 gattgtcttt caacgcagcg tgagtctaat ggttgaataa aacttactga tgatcaaaaa
1381 aaaaaaaaaa
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