LOCUS BC009621 1186 bp mRNA linear HUM 03-NOV-2005 DEFINITION Homo sapiens recombination activating gene 1 activating protein 1, mRNA (cDNA clone MGC:17029 IMAGE:3896154), complete cds. ACCESSION BC009621 VERSION BC009621.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1186) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1186) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-JUN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 14 Row: h Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 10047123. FEATURES Location/Qualifiers source 1..1186 /db_xref="H-InvDB:HIT000034479" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17029 IMAGE:3896154" /tissue_type="Pancreas, epithelioid carcinoma" /clone_lib="NIH_MGC_70" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1186 /gene="RAG1AP1" /gene_synonym="RP11-540D14.5" /gene_synonym="SCP" /gene_synonym="slv" /db_xref="GeneID:55974" /db_xref="HGNC:HGNC:30657" /db_xref="IMGT/GENE-DB:30657" /db_xref="MIM:30657" CDS 63..566 /gene="RAG1AP1" /gene_synonym="RP11-540D14.5" /gene_synonym="SCP" /gene_synonym="slv" /codon_start=1 /product="RAG1AP1 protein" /protein_id="AAH09621.1" /db_xref="GeneID:55974" /db_xref="HGNC:HGNC:30657" /db_xref="IMGT/GENE-DB:30657" /db_xref="MIM:30657" /translation="MEAGGFLDSLIYGACVVFTLGMFSAGLSDLRHMRMTRSVDNVQF LPFLTTEVNNLGWLSYGALKGDGILIVVNTVGAALQTLYILAYLHYCPRKAKVIQTKS TQCLSYPLTIATLLTSASWCLYGFRLRDPYIMVSNFPGIVTSFIRFWLFWKYPQEQDR NYWLLQT" BASE COUNT 311 a 291 c 296 g 288 t ORIGIN 1 gtaggtcccg gcaaccgcag gctcgcggcg ggcgctgggc gcgggatccg actctagtcg 61 taatggaggc gggcggcttt ctggactcgc tcatttacgg agcatgcgtg gtcttcaccc 121 ttggcatgtt ctccgccggc ctctcggacc tcaggcacat gcgaatgacc cggagtgtgg 181 acaacgtcca gttcctgccc tttctcacca cggaagtcaa caacctgggc tggctgagtt 241 atggggcttt gaagggagac gggatcctca tcgtcgtcaa cacagtgggt gctgcgcttc 301 agaccctgta tatcttggca tatctgcatt actgccctcg gaaggctaag gtgattcaaa 361 ctaaatcaac ccaatgtctc tcctacccac tcaccattgc tacccttctc acctctgcct 421 cctggtgcct ctatgggttt cgactcagag atccctatat catggtgtcc aactttccag 481 gaatcgtcac cagctttatc cgcttctggc ttttctggaa gtacccccag gagcaagaca 541 ggaactactg gctcctgcaa acctgaggct gctcatctga ccactgggca ccttagtgcc 601 aacctgaacc aaagagacct ccttgtttca gctgggcctg ctgtccagct tcccaggtgc 661 agtgggttgt gggaacaaga gatgactttg aggataaaag gaccaaagaa aaagctttac 721 ttagatgatt gattggggcc taggagatga aatcactttt tattttttag agattttttt 781 ttttaatttt ggaggttggg gtgcaatctt tagaatatgc cttaaaaggc cgggcgcggt 841 ggctcacgcc tgtaatccca gcactttggg aggccaaggt gggcggatcg cctgaggtca 901 ggagttcaag accaacctga ctaacatggt gaaaccccat ctctactaaa aatacaaaat 961 tagccaggca tgatggcaca tgcctgtaat cccagatact tgggaggctg aggcaggaga 1021 attgcttgaa cccaggaggt ggaggttgca gtgagctgag atcgtgccat tgtgatatga 1081 atatgcctta tatgctgata tgaatatgcc ttaaaataaa gtgttcccca cccctgcaaa 1141 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa //