LOCUS BC009621 1186 bp mRNA linear HUM 03-NOV-2005
DEFINITION Homo sapiens recombination activating gene 1 activating protein 1,
mRNA (cDNA clone MGC:17029 IMAGE:3896154), complete cds.
ACCESSION BC009621
VERSION BC009621.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1186)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1186)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: h Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 10047123.
FEATURES Location/Qualifiers
source 1..1186
/db_xref="H-InvDB:HIT000034479"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17029 IMAGE:3896154"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1186
/gene="RAG1AP1"
/gene_synonym="RP11-540D14.5"
/gene_synonym="SCP"
/gene_synonym="slv"
/db_xref="GeneID:55974"
/db_xref="HGNC:HGNC:30657"
/db_xref="IMGT/GENE-DB:30657"
/db_xref="MIM:30657"
CDS 63..566
/gene="RAG1AP1"
/gene_synonym="RP11-540D14.5"
/gene_synonym="SCP"
/gene_synonym="slv"
/codon_start=1
/product="RAG1AP1 protein"
/protein_id="AAH09621.1"
/db_xref="GeneID:55974"
/db_xref="HGNC:HGNC:30657"
/db_xref="IMGT/GENE-DB:30657"
/db_xref="MIM:30657"
/translation="MEAGGFLDSLIYGACVVFTLGMFSAGLSDLRHMRMTRSVDNVQF
LPFLTTEVNNLGWLSYGALKGDGILIVVNTVGAALQTLYILAYLHYCPRKAKVIQTKS
TQCLSYPLTIATLLTSASWCLYGFRLRDPYIMVSNFPGIVTSFIRFWLFWKYPQEQDR
NYWLLQT"
BASE COUNT 311 a 291 c 296 g 288 t
ORIGIN
1 gtaggtcccg gcaaccgcag gctcgcggcg ggcgctgggc gcgggatccg actctagtcg
61 taatggaggc gggcggcttt ctggactcgc tcatttacgg agcatgcgtg gtcttcaccc
121 ttggcatgtt ctccgccggc ctctcggacc tcaggcacat gcgaatgacc cggagtgtgg
181 acaacgtcca gttcctgccc tttctcacca cggaagtcaa caacctgggc tggctgagtt
241 atggggcttt gaagggagac gggatcctca tcgtcgtcaa cacagtgggt gctgcgcttc
301 agaccctgta tatcttggca tatctgcatt actgccctcg gaaggctaag gtgattcaaa
361 ctaaatcaac ccaatgtctc tcctacccac tcaccattgc tacccttctc acctctgcct
421 cctggtgcct ctatgggttt cgactcagag atccctatat catggtgtcc aactttccag
481 gaatcgtcac cagctttatc cgcttctggc ttttctggaa gtacccccag gagcaagaca
541 ggaactactg gctcctgcaa acctgaggct gctcatctga ccactgggca ccttagtgcc
601 aacctgaacc aaagagacct ccttgtttca gctgggcctg ctgtccagct tcccaggtgc
661 agtgggttgt gggaacaaga gatgactttg aggataaaag gaccaaagaa aaagctttac
721 ttagatgatt gattggggcc taggagatga aatcactttt tattttttag agattttttt
781 ttttaatttt ggaggttggg gtgcaatctt tagaatatgc cttaaaaggc cgggcgcggt
841 ggctcacgcc tgtaatccca gcactttggg aggccaaggt gggcggatcg cctgaggtca
901 ggagttcaag accaacctga ctaacatggt gaaaccccat ctctactaaa aatacaaaat
961 tagccaggca tgatggcaca tgcctgtaat cccagatact tgggaggctg aggcaggaga
1021 attgcttgaa cccaggaggt ggaggttgca gtgagctgag atcgtgccat tgtgatatga
1081 atatgcctta tatgctgata tgaatatgcc ttaaaataaa gtgttcccca cccctgcaaa
1141 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//