LOCUS BC009603 1361 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens BCL2/adenovirus E1B 19kDa interacting protein 3-like,
mRNA (cDNA clone MGC:14695 IMAGE:4134765), complete cds.
ACCESSION BC009603
VERSION BC009603.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1361)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1361)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: f Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47078259.
FEATURES Location/Qualifiers
source 1..1361
/db_xref="H-InvDB:HIT000034466"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14695 IMAGE:4134765"
/tissue_type="Bone marrow, chronic myelogenous leukemia"
/clone_lib="NIH_MGC_54"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1361
/gene="BNIP3L"
/gene_synonym="BNIP3a"
/gene_synonym="NIX"
/db_xref="GeneID:665"
/db_xref="HGNC:HGNC:1085"
/db_xref="MIM:605368"
CDS 93..752
/gene="BNIP3L"
/gene_synonym="BNIP3a"
/gene_synonym="NIX"
/codon_start=1
/product="BCL2/adenovirus E1B 19kDa interacting protein
3-like"
/protein_id="AAH09603.1"
/db_xref="GeneID:665"
/db_xref="HGNC:HGNC:1085"
/db_xref="MIM:605368"
/translation="MSSHLVEPPPPLHNNNNNCEENEQSLPPPAGLNSSWVELPMNSS
NGNDNGNGKNGGLEHVPSSSSIHNGDMEKILLDAQHESGQSSSRGSSHCDSPSPQEDG
QIMFDVEMHTSRDHSSQSEEEVVEGEKEVEALKKSADWVSDWSSRPENIPPKEFHFRH
PKRSVSLSMRKSGAMKKGGIFSAEFLKVFIPSLFLSHVLALGLGIYIGKRLSTPSAST
Y"
BASE COUNT 427 a 303 c 292 g 339 t
ORIGIN
1 gaaaaagggg gcggcggact cggcttgttg tgttgctgcc tgagtgccgg agacggtcct
61 gctgctgccg cagtcctgcc agctgtccga caatgtcgtc ccacctagtc gagccgccgc
121 cgcccctgca caacaacaac aacaactgcg aggaaaatga gcagtctctg cccccgccgg
181 ccggcctcaa cagttcctgg gtggagctac ccatgaacag cagcaatggc aatgataatg
241 gcaatgggaa aaatgggggg ctggaacacg taccatcctc atcctccatc cacaatggag
301 acatggagaa gattcttttg gatgcacaac atgaatcagg acagagtagt tccagaggca
361 gttctcactg tgacagccct tcgccacaag aagatgggca gatcatgttt gatgtggaaa
421 tgcacaccag cagggaccat agctctcagt cagaagaaga agttgtagaa ggagagaagg
481 aagtcgaggc tttgaagaaa agtgcggact gggtatcaga ctggtccagt agacccgaaa
541 acattccacc caaggagttc cacttcagac accctaaacg ttctgtgtct ttaagcatga
601 ggaaaagtgg agccatgaag aaagggggta ttttctccgc agaatttctg aaggtgttca
661 ttccatctct cttcctttct catgttttgg ctttggggct aggcatctat attggaaagc
721 gactgagcac accctctgcc agcacctact gagggaaagg aaaagcccct ggaaatgcgt
781 gtgacctgtg aagtggtgta ttgtcacagt agcttatttg aacttgagac cattgtaagc
841 atgacccaac ctaccaccct gtttttacat atccaattcc agtaactctc aaattcaata
901 ttttattcaa actctgttga ggcattttac taaccttata ccctttttgg cctgaagaca
961 ttttagaatt tcctaacaga gtttactgtt gtttagaaat ttacaagggc ttcttttccg
1021 caaatgccac cagcagatta taattttgtc agcaatgcta ttatctctaa ttagtgccac
1081 cagactagac ctgtatcatt catggtataa attttactct tgcaacataa ctaccatctc
1141 tctcttaaaa cgagatcagg ttagcaaatg atgtaaaaga agctttattg tctagttgtt
1201 ttttttcccc caagacaaag gcaagtttcc ctaagtttga gttgatagtt attaaaaaga
1261 aaacaaaaca aaaaaaaaag gcaaggcaca acaaaaaaat atcctgggca ataaaaaaaa
1321 tattttaaac caaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
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