LOCUS BC009585 1411 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens eukaryotic translation initiation factor 4A, isoform
1, mRNA (cDNA clone MGC:14648 IMAGE:4096621), complete cds.
ACCESSION BC009585
VERSION BC009585.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1411)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1411)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: f Column: 5.
FEATURES Location/Qualifiers
source 1..1411
/db_xref="H-InvDB:HIT000034452"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14648 IMAGE:4096621"
/tissue_type="Bone marrow, chronic myelogenous leukemia"
/clone_lib="NIH_MGC_54"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1411
/gene="EIF4A1"
/gene_synonym="DDX2A"
/gene_synonym="EIF-4A"
/db_xref="GeneID:1973"
/db_xref="HGNC:HGNC:3282"
/db_xref="MIM:602641"
CDS 15..1235
/gene="EIF4A1"
/gene_synonym="DDX2A"
/gene_synonym="EIF-4A"
/codon_start=1
/product="eukaryotic translation initiation factor 4A,
isoform 1"
/protein_id="AAH09585.1"
/db_xref="GeneID:1973"
/db_xref="HGNC:HGNC:3282"
/db_xref="MIM:602641"
/translation="MSASQDSRSRDNGPDGMEPEGVIESNWNEIVDSFDDMNLSESLL
RGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQ
ALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPG
RVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPS
DVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAV
IFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLAR
GIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYN
TSIEEMPLNVADLI"
BASE COUNT 392 a 331 c 368 g 320 t
ORIGIN
1 agtttctaag gatcatgtct gcgagccagg attcccgatc cagagacaat ggccccgatg
61 ggatggagcc cgaaggcgtc atcgagagta actggaatga gattgttgac agctttgatg
121 acatgaacct ctcggagtcc cttctccgtg gcatctacgc ctatggtttt gagaagccct
181 ctgccatcca gcagcgagcc attctacctt gtatcaaggg ttatgatgtg attgctcaag
241 cccaatctgg gactgggaaa acggccacat ttgccatatc aattctgcag cagattgaat
301 tagatctaaa agccacccag gccttggtcc tagcacccac tcgagaattg gctcagcaga
361 tacagaaggt ggtcatggca ctaggagact acatgggcgc ctcctgtcac gcctgtatcg
421 ggggcaccaa cgtgcgtgct gaggtgcaga aactgcagat ggaagctccc cacatcatcg
481 tgggtacccc tggccgtgtg tttgatatgc ttaaccggag atacctgtcc cccaaataca
541 tcaagatgtt tgtactggat gaagctgacg aaatgttaag ccgtggattc aaggaccaga
601 tctatgacat attccaaaag ctcaacagca acacccaggt agttttgctg tcagccacaa
661 tgccttctga tgtgcttgag gtgaccaaga agttcatgag ggaccccatt cggattcttg
721 tcaagaagga agagttgacc ctggagggta tccgccagtt ctacatcaac gtggaacgag
781 aggagtggaa gctggacaca ctatgtgact tgtatgaaac cctgaccatc acccaggcag
841 tcatcttcat caacacccgg aggaaggtgg actggctcac cgagaagatg catgctcgag
901 atttcactgt atccgccatg catggagata tggaccaaaa ggaacgagac gtgattatga
961 gggagtttcg ttctggctct agcagagttt tgattaccac tgacctgctg gccagaggca
1021 ttgatgtgca gcaggtttct ttagtcatca actatgacct tcccaccaac agggaaaact
1081 atatccacag aatcggtcga ggtggacggt ttggccgtaa aggtgtggct attaacatgg
1141 tgacagaaga agacaagagg actcttcgag acattgagac cttctacaac acctccattg
1201 aggaaatgcc cctcaatgtt gctgacctca tctgaggggc tgtcctgcca cccagcccca
1261 gccagggctc aatctctggg ggctgaggag cagcaggagg ggggagggaa gggagccaag
1321 ggatggacat cttgtcattt tttttctttg aataaatgtc actttttgag gcaaaagaag
1381 gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//