LOCUS BC009568 1243 bp mRNA linear HUM 03-OCT-2003 DEFINITION Homo sapiens synaptogyrin 3, mRNA (cDNA clone MGC:12440 IMAGE:3932502), complete cds. ACCESSION BC009568 VERSION BC009568.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1243) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1243) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (29-JUN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 16 Row: h Column: 13. FEATURES Location/Qualifiers source 1..1243 /db_xref="H-InvDB:HIT000034439" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:12440 IMAGE:3932502" /tissue_type="Brain" /clone_lib="NIH_MGC_73" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1243 /gene="SYNGR3" /gene_synonym="MGC:20003" /db_xref="GeneID:9143" /db_xref="MIM:603927" CDS 105..542 /gene="SYNGR3" /gene_synonym="MGC:20003" /codon_start=1 /product="SYNGR3 protein" /protein_id="AAH09568.1" /db_xref="GeneID:9143" /db_xref="MIM:603927" /translation="MEGASFGAGRAGAALDPVSFARRPQTLLRVASWVFSIAVFGPIV NEGYVNTDSGPELRCVFNGNAGACRFGVALGLGAFLACAAFLLLDVRFQQSGGRGKTP PSPQDWGSWPLFPSHVPVGSDCLVSVMVVRPVRSHSPLSLTGC" misc_feature 147..386 /gene="SYNGR3" /gene_synonym="MGC:20003" /note="Synaptogyrin; Region: Synaptogyrin. This family of proteins is distantly related to pfam01284" /db_xref="CDD:pfam03218" BASE COUNT 240 a 401 c 340 g 262 t ORIGIN 1 atcagcatca gcatcagcgg cagcggcagc ggcctcgggc ggggccggcc ggacggacag 61 gcggacagaa ggcgccaggg gcgcgcgtcc cgcccgggcc ggccatggag ggcgcctcct 121 tcggcgcggg ccgcgcaggg gccgccctgg accccgtgag ctttgcgcgg cggccccaga 181 ccctgctccg ggtcgcgtcc tgggtgttct ccatcgccgt cttcgggccc atcgtcaacg 241 agggctacgt gaacaccgac agcggccccg agctgcgctg cgtgttcaac gggaacgcgg 301 gcgcctgccg cttcggcgtc gcgctgggcc tcggagcctt cctcgcctgc gccgccttcc 361 tgctgctcga tgtgcgcttc cagcaaagcg ggggcagggg aaagacacca ccctcgcccc 421 aagactgggg atcctggcca ctgttcccat cccatgtccc tgtgggtagt gactgtctcg 481 tttctgtcat ggtggtgcgt cccgtccgga gccactctcc actttctctc acaggctgct 541 agaacagccc agccctgtca gtgttgtgat catggtccag tcttcgggtt tcacctccta 601 gtactccaca agctgctcct ctctctgtgg ccccggcccc tgcccaggtg tgggtggttc 661 tggccaggaa ggcacaaggt agctgtgggc caagacacca gccctgtcct agcccttcag 721 taagaccttg ccaggagagg agaaggatgc ctgggtgcca ggcaagacaa gcccctcagc 781 aggagagagg cccagaggct ccagctggcc accgtgcccc acaagatggc ccctgtgtgg 841 ttccctttac cttggcttcc tggcccagtc cctgcctctc cacctgcacc ctgcttcctg 901 gcccagtccc aggttggagt ccctctgcat agctgactac tcatgcattg ctcaaagctg 961 gcttttcaca ttaagtcaac accaaacgtg gttgccacat ttcatcagac agacacctcc 1021 ctctggagat gcagttgagt gacaaccttg ttacattgta gcctagacca attctgtgtg 1081 gatatttaag tgaacatgtt tacaattttt gtatatatca ctctctccct ctcctgaaag 1141 accagagatt gtgtattttc agtgtcccat gttccgactg caccttcttt acaataaaga 1201 ctgtaactga gctaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa //