LOCUS BC009558 1156 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens shisa homolog 4 (Xenopus laevis), mRNA (cDNA clone
IMAGE:3899550), partial cds.
ACCESSION BC009558
VERSION BC009558.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1156)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1156)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: l Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39930574.
FEATURES Location/Qualifiers
source 1..1156
/db_xref="H-InvDB:HIT000087325"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3899550"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1156
/gene="SHISA4"
/gene_synonym="hShisa4"
/db_xref="GeneID:149345"
/db_xref="HGNC:HGNC:27139"
CDS <1..689
/gene="SHISA4"
/gene_synonym="hShisa4"
/codon_start=3
/product="SHISA4 protein"
/protein_id="AAH09558.1"
/db_xref="GeneID:149345"
/db_xref="HGNC:HGNC:27139"
/translation="AGWAPPQLQLAGLVLRSLLWEARPRPRPAPTMPPAGLRRAAPLT
AIALLVLGAPLVLAGEDCLWYLDRNGSWHPGFNCEFFTFCCGTCYHRYCCRDLTLLIT
ERQQKHCLAFSPKTIAGIASAVILFVAVVATTICCFLCSCCYLYRRRQQLQSPFEGQE
IPMTGIPVQPVYPYPQDPKAGPAPPQPGFIYPPSGPAPQYPLYPAGPPVYNPAAPPPY
MPPQPSYPGA"
BASE COUNT 210 a 394 c 324 g 228 t
ORIGIN
1 ccgcgggctg ggccccgccg cagctccagc tggccggctt ggtcctgcgg tcccttctct
61 gggaggcccg accccggccg cgcccagccc ccaccatgcc acccgcgggg ctccgccggg
121 ccgcgccgct caccgcaatc gctctgttgg tgctgggggc tcccctggtg ctggccggcg
181 aggactgcct gtggtacctg gaccggaatg gctcctggca tccggggttt aactgcgagt
241 tcttcacctt ctgctgcggg acctgctacc atcggtactg ctgcagggac ctgaccttgc
301 ttatcaccga gaggcagcag aagcactgcc tggccttcag ccccaagacc atagcaggca
361 tcgcctcagc tgtgatcctc tttgttgctg tggttgccac caccatctgc tgcttcctct
421 gttcctgttg ctacctgtac cgccggcgcc agcagctcca gagcccattt gaaggccagg
481 agattccaat gacaggcatc ccagtgcagc cagtataccc atacccccag gaccccaaag
541 ctggccctgc acccccacag cctggcttca tatacccacc tagtggtcct gctccccaat
601 atccactcta cccagctggg cccccagtct acaaccctgc agctcctcct ccctatatgc
661 caccacagcc ctcttacccg ggagcctgag gaaccagcca tgtctctgct gccccttcag
721 tgatgccaac cttgggagat gccctcatcc tgtacctgca tctggtcctg ggggtggcag
781 gagtcctcca gccaccaggc cccagaccaa gccaagccct gggccctact ggggacagag
841 ccccagggaa gtggaacagg agctgaacta gaactatgag gggttggggg gagggcttgg
901 aattatgggc tatttttact gggggcaagg gagggagatg acagcctggg tcacagtgcc
961 tgttttcaaa tagtccctct gctcccaaga tcccagccag gaaggctggg gccctactgt
1021 ttgtcccctc tgggctgggg tggggggagg gaggaggttc cgtcagcagc tggcagtagc
1081 cctcctctct ggctgcccca ctggccacat ctctggcctg ctagattaaa gctgtaaaga
1141 caaaaaaaaa aaaaaa
//