LOCUS BC009556 1374 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens selenoprotein T, mRNA (cDNA clone MGC:10108
IMAGE:3899430), complete cds.
ACCESSION BC009556
VERSION BC009556.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1374)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1374)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: l Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..1374
/db_xref="H-InvDB:HIT000087323"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10108 IMAGE:3899430"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1374
/gene="SELT"
/db_xref="GeneID:51714"
/db_xref="MIM:607912"
CDS 17..604
/gene="SELT"
/codon_start=1
/transl_except=(pos:161..163,aa:Sec)
/product="selenoprotein T"
/protein_id="AAH09556.2"
/db_xref="GeneID:51714"
/db_xref="MIM:607912"
/translation="MRLLLLLLVAASAMVRSEASANLGGVPSKRLKMQYATGPLLKFQ
ICVSUGYRRVFEEYMRVISQRYPDIRIEGENYLPQPIYRHIASFLSVFKLVLIGLIIV
GKDPFAFFGMQAPSIWQWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWS
KLESGHLPSMQQLVQILDNEMKLNVHMDSIPHHRS"
BASE COUNT 400 a 254 c 282 g 438 t
ORIGIN
1 ggctggctca tttaagatga ggcttctgct gcttctccta gtggcggcgt ctgcgatggt
61 ccggagcgag gcctcggcca atctgggcgg cgtgcccagc aagagattaa agatgcagta
121 cgccacgggg ccgctgctca agttccagat ttgtgtttcc tgaggttata ggcgggtgtt
181 tgaggagtac atgcgggtta ttagccagcg gtacccagac atccgcattg aaggagagaa
241 ttacctccct caaccaatat atagacacat agcatctttc ctgtcagtct tcaaactagt
301 attaataggc ttaataattg ttggcaagga tccttttgct ttctttggca tgcaagctcc
361 tagcatctgg cagtggggcc aagaaaataa ggtttatgca tgtatgatgg ttttcttctt
421 gagcaacatg attgagaacc agtgtatgtc aacaggtgca tttgagataa ctttaaatga
481 tgtacctgtg tggtctaagc tggaatctgg tcaccttcca tccatgcaac aacttgttca
541 aattcttgac aatgaaatga agctcaatgt gcatatggat tcaatcccac accatcgatc
601 atagcaccac ctatcagcac tgaaaactct tttgcattaa gggatcattg caagagcagc
661 gtgactgaca ttatgaaggc ctgtactgaa gacagcaagc tgttagtaca gaccagatgc
721 tttcttggca ggctcgttgt acctcttgga aaacctcaat gcaagatagt gtttcagtgc
781 tggcatattt tggaattctg cacattcatg gagtgcaata atactgtata gctttcccca
841 cctcccacaa aatcacccag ttaatgtgtg tgtgtgtgtt ttttttaagg taaacattac
901 tacttgtaac tttttttctt agtcatattt gaaaaagtag aaaattgagt tacaatttga
961 ttttttttcc aaagatgtct gttaaatctg ttgtgctttt atatgaatat ttgtttttta
1021 tagtttaaaa ttgatccttt gggaatccag ttgaagttcc caaatacttt ataagagttt
1081 atcagacatc tctaatttgg ccatgtccag tttatacagt ttacaaaata tagcagatgc
1141 aagattatgg gggaaatcct atattcagag tactctataa atttttgtgt atgtgtgtat
1201 gtgcgtgtga ttaccagaga actactaaaa aaaccaactg ctttttaaat cctattgtgt
1261 agttaaagtg tcatgccttg accaatctaa tgaattgatt aattaactgg gcctttatac
1321 ttaactaaat aaaaaactaa gcagatatga gttaaattta aaaaaaaaaa aaaa
//