LOCUS BC009556 1374 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens selenoprotein T, mRNA (cDNA clone MGC:10108 IMAGE:3899430), complete cds. ACCESSION BC009556 VERSION BC009556.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1374) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1374) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-JUN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 14 Row: l Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis, Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..1374 /db_xref="H-InvDB:HIT000087323" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:10108 IMAGE:3899430" /tissue_type="Pancreas, epithelioid carcinoma" /clone_lib="NIH_MGC_70" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1374 /gene="SELT" /db_xref="GeneID:51714" /db_xref="MIM:607912" CDS 17..604 /gene="SELT" /codon_start=1 /transl_except=(pos:161..163,aa:Sec) /product="selenoprotein T" /protein_id="AAH09556.2" /db_xref="GeneID:51714" /db_xref="MIM:607912" /translation="MRLLLLLLVAASAMVRSEASANLGGVPSKRLKMQYATGPLLKFQ ICVSUGYRRVFEEYMRVISQRYPDIRIEGENYLPQPIYRHIASFLSVFKLVLIGLIIV GKDPFAFFGMQAPSIWQWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWS KLESGHLPSMQQLVQILDNEMKLNVHMDSIPHHRS" BASE COUNT 400 a 254 c 282 g 438 t ORIGIN 1 ggctggctca tttaagatga ggcttctgct gcttctccta gtggcggcgt ctgcgatggt 61 ccggagcgag gcctcggcca atctgggcgg cgtgcccagc aagagattaa agatgcagta 121 cgccacgggg ccgctgctca agttccagat ttgtgtttcc tgaggttata ggcgggtgtt 181 tgaggagtac atgcgggtta ttagccagcg gtacccagac atccgcattg aaggagagaa 241 ttacctccct caaccaatat atagacacat agcatctttc ctgtcagtct tcaaactagt 301 attaataggc ttaataattg ttggcaagga tccttttgct ttctttggca tgcaagctcc 361 tagcatctgg cagtggggcc aagaaaataa ggtttatgca tgtatgatgg ttttcttctt 421 gagcaacatg attgagaacc agtgtatgtc aacaggtgca tttgagataa ctttaaatga 481 tgtacctgtg tggtctaagc tggaatctgg tcaccttcca tccatgcaac aacttgttca 541 aattcttgac aatgaaatga agctcaatgt gcatatggat tcaatcccac accatcgatc 601 atagcaccac ctatcagcac tgaaaactct tttgcattaa gggatcattg caagagcagc 661 gtgactgaca ttatgaaggc ctgtactgaa gacagcaagc tgttagtaca gaccagatgc 721 tttcttggca ggctcgttgt acctcttgga aaacctcaat gcaagatagt gtttcagtgc 781 tggcatattt tggaattctg cacattcatg gagtgcaata atactgtata gctttcccca 841 cctcccacaa aatcacccag ttaatgtgtg tgtgtgtgtt ttttttaagg taaacattac 901 tacttgtaac tttttttctt agtcatattt gaaaaagtag aaaattgagt tacaatttga 961 ttttttttcc aaagatgtct gttaaatctg ttgtgctttt atatgaatat ttgtttttta 1021 tagtttaaaa ttgatccttt gggaatccag ttgaagttcc caaatacttt ataagagttt 1081 atcagacatc tctaatttgg ccatgtccag tttatacagt ttacaaaata tagcagatgc 1141 aagattatgg gggaaatcct atattcagag tactctataa atttttgtgt atgtgtgtat 1201 gtgcgtgtga ttaccagaga actactaaaa aaaccaactg ctttttaaat cctattgtgt 1261 agttaaagtg tcatgccttg accaatctaa tgaattgatt aattaactgg gcctttatac 1321 ttaactaaat aaaaaactaa gcagatatga gttaaattta aaaaaaaaaa aaaa //