LOCUS BC009518 2705 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens coiled-coil domain containing 45, mRNA (cDNA clone
MGC:10965 IMAGE:3633884), complete cds.
ACCESSION BC009518
VERSION BC009518.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2705)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2705)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: a Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923898.
FEATURES Location/Qualifiers
source 1..2705
/db_xref="H-InvDB:HIT000034421"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10965 IMAGE:3633884"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2705
/gene="CCDC45"
/db_xref="GeneID:90799"
/db_xref="HGNC:HGNC:25141"
CDS 59..2524
/gene="CCDC45"
/codon_start=1
/product="coiled-coil domain containing 45"
/protein_id="AAH09518.1"
/db_xref="GeneID:90799"
/db_xref="HGNC:HGNC:25141"
/translation="MAGSDAEWVTIANNLLFKCHIHLRIHELQDCDANVFIALYQSIL
GEKVPDLIVIPRSQEDDAHNVQAVIDSLALDYLQVSLSHITGENIVKGDKESIKNLLE
IFDGLLEYLTERISETSHEKSETEQYFKESDRGERLEEPESTKESKSSWKRVSFGRCS
LSSEMLGPSWDGDEAESTGEIIRLGDTAHTFSLRSNGAQCPNEMLSKKALASPSSKSH
EDMLYPPSVLSKSRTSFVEDTETLSVSGIPNARKLGEPIRAAIPLHPPYHPSEPRAPC
PIGKEYLHSSHCSPAVNSTGEHTEFSGDLDDGLFLISKLPKGSKWEVYPAQVQGPRTR
KPPKGKRNENRATASSCNSPFPQRPRKRLTEQELHDVSEKLSQRLSELDWMLKSALGD
RIKEKTDHKEENTGNEEVEDGTEETLSQHSDGIVEYGPKKSRPGLSMRRKPPYRSHSL
SPSPVNKHKQFHLERKRQRKPRETDVRQFQAQAFTEAFERELRRHKVQENIGPLRIHE
KEEETEKIYRGEAVRKGTPECSQPWKIYSRKTTTQSLRGGLPKPNKAVPMKVSEHSLL
PLMLEQFPFLYVSGPTLSKMWKQQIAQVEQLKKEACRENRSKKKLQDEIEEALRRHDL
LTTLVKKEYEHNKRLQDFKDCIRRQRLTQSKIKENRQQIVRARKYYDDYRVQLCAKMM
RMRTREEMIFKKLFEEGLNIQKQRLRDLRNYAKEKRDEQRRRHQDELDSMENYYKDQF
SLLAEAISQEHQELKAREKSQAQTLHKVKRELRSKMEKEIQQLQDMITQNDDDVFFRE
LEAERFRSRLQLASFQYSKSPSL"
BASE COUNT 935 a 538 c 603 g 629 t
ORIGIN
1 caggacaccg tcgccttccc ggccgcgtcg gagtccggcg gcgacctgcc tctgaaacat
61 ggcaggctcg gatgctgagt gggtaaccat tgccaataac cttcttttta agtgtcatat
121 acatctgaga atacatgaac ttcaagactg tgatgctaat gtttttattg ctctttatca
181 gtctattttg ggagaaaagg taccagacct catagttatt cctaggagtc aagaagatga
241 tgcacacaat gtacaagcag taattgattc actggccttg gactacttgc aggtcagctt
301 gtctcacata acaggagaaa atatagtgaa aggagataaa gaatctatta agaatctcct
361 ggaaatattt gatggtttgt tggagtatct tacagaacgc atcagtgaaa catctcatga
421 gaaaagtgaa actgaacagt attttaaaga atctgatcga ggagaacgtt tggaagagcc
481 agaaagtact aaagaatcta aatcatcatg gaaaagagtt tcttttggga ggtgctcctt
541 gtcttctgag atgttgggcc cctcttggga tggagatgaa gcagaatcca ctggtgaaat
601 cattagactt ggagacacag cacacacctt ttctctaaga agtaatggtg ctcaatgtcc
661 taatgaaatg ctgtctaaaa aagccttagc ctcaccaagt tctaaatcac atgaagatat
721 gttgtaccct cctagtgttt tgtccaagag taggacatcc tttgttgaag acacggaaac
781 cctttctgtg agtgggattc caaatgctag gaagctaggg gagcctatcc gagcagctat
841 tcctttacat ccaccctacc acccttcaga gcctcgagca ccctgcccca taggaaaaga
901 atacttgcat tcaagtcact gctccccagc cgtaaattct actggagagc atacggaatt
961 ttctggggat ctagatgatg gacttttctt aatttccaag ttgcctaaag gcagcaaatg
1021 ggaagtatat ccagctcagg tccaagggcc taggacaagg aagcctccca aaggaaaaag
1081 aaatgaaaac agagctacag cctcatcctg caattcacct ttcccccaga ggccaagaaa
1141 gagattaaca gaacaagaat tacatgatgt atcagaaaaa ctctctcagc ggctttctga
1201 actagattgg atgttaaaaa gtgctctggg tgatcggatt aaagaaaaga ctgaccataa
1261 agaagaaaat actggaaatg aggaggtaga ggatggaact gaggagacac tgtctcagca
1321 cagtgatggc atcgtggagt atgggccaaa gaagtcaagg ccaggacttt ccatgcgtag
1381 aaagccaccc tacagatccc attcgctctc tccatctcca gttaacaaac acaaacagtt
1441 ccacttggag agaaaaaggc agcgcaagcc aagagaaaca gatgtccgcc aattccaagc
1501 acaggcgttt actgaagcat ttgaaaggga actaagaaga cataaagttc aagagaatat
1561 tggacctcta agaatacatg agaaggagga ggaaacagaa aaaatataca gaggagaagc
1621 tgttcgtaaa ggaactccag aatgtagtca gccctggaag atttactcta gaaaaaccac
1681 aacgcagagt ctaagaggtg gcctcccaaa gccaaataaa gcagttccaa tgaaagtaag
1741 tgaacacagt ctcctgcccc ttatgctgga gcagtttccg tttctttatg tttctggccc
1801 aacactaagc aaaatgtgga aacagcaaat tgcacaggtt gaacagctta agaaagaagc
1861 atgtagagaa aatcgatcaa agaagaaact ccaagatgaa atagaagaag ccctaagaag
1921 gcatgacctc cttactaccc ttgtcaagaa agaatatgaa cataacaaga gactgcaaga
1981 cttcaaggac tgcattcgta ggcaaaggtt gacccaatca aagataaaag aaaatcgaca
2041 gcaaatcgtt cgtgctcgaa aatattatga tgattataga gttcagttgt gtgcaaaaat
2101 gatgagaatg aggacccggg aagaaatgat atttaagaaa ctgtttgaag aaggtttaaa
2161 cattcaaaag caaagattac gagacctaag aaactatgcc aaagaaaagc gagatgaaca
2221 aaggagacgc caccaggatg aactggactc catggagaac tactataagg accagttttc
2281 attgctggca gaagccatat cacaggaaca tcaagaactt aaagccagag agaaatctca
2341 ggcccagaca ttacataagg tgaagaggga gctgagatct aagatggaga aggaaattca
2401 gcagctgcag gacatgataa cacagaatga tgatgatgtt ttcttccggg aactggaagc
2461 tgagcgcttc agatctcggc ttcagctggc ttcctttcag tacagtaaaa gtccctccct
2521 atgaggccag acttgataat agtaggtgaa ggttctggag gcctttacca ggacagagct
2581 agaatcgagc cagtaaacag tctaagccag aaaaataatt ttcaaatgct ttacctgtat
2641 tttcattcca gtacttttta tgatttttta aataaaaatt gttttctaaa aaaaaaaaaa
2701 aaaaa
//