LOCUS BC009511 932 bp mRNA linear HUM 12-NOV-2003
DEFINITION Homo sapiens secretogranin III, mRNA (cDNA clone IMAGE:3537207),
partial cds.
ACCESSION BC009511
VERSION BC009511.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 932)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 932)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC009511.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: a Column: 14.
FEATURES Location/Qualifiers
source 1..932
/db_xref="H-InvDB:HIT000087297"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3537207"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..932
/gene="SCG3"
/gene_synonym="SGIII"
/db_xref="GeneID:29106"
CDS <1..702
/gene="SCG3"
/gene_synonym="SGIII"
/codon_start=1
/product="SCG3 protein"
/protein_id="AAH09511.2"
/db_xref="GeneID:29106"
/translation="IQDGLAKGENDETVSNTLTLTNGLERRTKTYSEDNFEELQYFPN
FYALLKSIDSEKEAKEKETLITIMKTLIDFVKMMVKYGTISPEEGVSYLENLDEMIAL
QTKNKLEKNATDNISKLFPAPSEKSHEETDSTKEEAAKMEKEYGSLKDSTKDDNSNPG
GKTDEPKGKTEAYLEAIRKNIEWLKKHDKKGNKEDYDLSKMRDFINKQADAYVEKGIL
DKEEAEAIKRIYSSL"
BASE COUNT 394 a 148 c 180 g 210 t
ORIGIN
1 attcaagatg gtcttgctaa gggagaaaac gatgaaacag tatctaacac attaaccttg
61 acaaatggct tggaaaggag aactaaaacc tacagtgaag acaactttga ggaactccaa
121 tatttcccaa atttctatgc gctactgaaa agtattgatt cagaaaaaga agcaaaagag
181 aaagaaacac tgattactat catgaaaaca ctgattgact ttgtgaagat gatggtgaaa
241 tatggaacaa tatctccaga agaaggtgtt tcctaccttg aaaacttgga tgaaatgatt
301 gctcttcaga ccaaaaacaa gctagaaaaa aatgctactg acaatataag caagcttttc
361 ccagcaccat cagagaagag tcatgaagaa acagacagta ccaaggaaga agcagctaag
421 atggaaaagg aatatggaag cttgaaggat tccacaaaag atgataactc caacccagga
481 ggaaagacag atgaacccaa aggaaaaaca gaagcctatt tggaagccat cagaaaaaat
541 attgaatggt tgaagaaaca tgacaaaaag ggaaataaag aagattatga cctttcaaag
601 atgagagact tcatcaataa acaagctgat gcttatgtgg agaaaggcat ccttgacaag
661 gaagaagccg aggccatcaa gcgcatttat agcagcctgt aaaaatggca aaagatccag
721 gagtctttca actgtttcag aaaacataat atagcttaaa acacttctaa ttctgtgatt
781 aaaatttttt gacccaaggg ttattagaaa gtgctgaatt tacagtagtt aaccttttac
841 aagtggttaa aacatagctt tcttcccgta aaaactatct gaaagtaaag ttgtatgtaa
901 gctgacaaaa aaaaaaaaaa aaaaaaaaaa aa
//