LOCUS BC009474 687 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens allograft inflammatory factor 1, mRNA (cDNA clone MGC:13674 IMAGE:4249306), complete cds. ACCESSION BC009474 VERSION BC009474.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 687) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 687) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-JUN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 19 Row: i Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 14574567. FEATURES Location/Qualifiers source 1..687 /db_xref="H-InvDB:HIT000034389_09" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:13674 IMAGE:4249306" /tissue_type="Prostate" /clone_lib="NIH_MGC_83" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..687 /gene="AIF1" /gene_synonym="AIF-1" /gene_synonym="IBA1" /gene_synonym="IRT-1" /db_xref="GeneID:199" /db_xref="HGNC:HGNC:352" /db_xref="MIM:601833" CDS 101..544 /gene="AIF1" /gene_synonym="AIF-1" /gene_synonym="IBA1" /gene_synonym="IRT-1" /codon_start=1 /product="allograft inflammatory factor 1" /protein_id="AAH09474.1" /db_xref="GeneID:199" /db_xref="HGNC:HGNC:352" /db_xref="MIM:601833" /translation="MSQTRDLQGGKAFGLLKAQQEERLDEINKQFLDDPKYSSDEDLP SKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFS YPDFLRMMLGKRSAILKMILMYEEKAREKEKPTGPPAKKAISELP" BASE COUNT 240 a 140 c 176 g 131 t ORIGIN 1 ggggaggctt ctgagaagac tggtgggaga gaaggagagc ctgcagacag aggcctccag 61 cttggtctgt ctccccacct ctaccagtat ctgctgagct atgagccaaa ccagggattt 121 acagggagga aaagctttcg gactgctgaa ggcccagcag gaagagaggc tggatgagat 181 caacaagcaa ttcctagacg atcccaaata tagcagtgat gaggatctgc cctccaaact 241 ggaaggcttc aaagagaaat acatggagtt tgaccttaat ggaaatggcg atattgatat 301 catgtccctg aaacgaatgc tggagaaact tggagtcccc aagactcacc tagagctaaa 361 gaaattaatt ggagaggtgt ccagtggctc cggggagacg ttcagctacc ctgactttct 421 caggatgatg ctgggcaaga gatctgccat cctaaaaatg atcctgatgt atgaggaaaa 481 agcgagagaa aaggaaaagc caacaggccc cccagccaag aaagctatct ctgagttgcc 541 ctgatttgaa gggaaaaggg atgatgggat tgaaggggct tctaatgacc cagatatgga 601 aacagaagac aaaattgtaa gccagagtca acaaattaaa taaattaccc cctcctccaa 661 aaaaaaaaaa aaaaaaaaaa aaaaaaa //