LOCUS BC009464 1796 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens mannosyl (alpha-1,3-)-glycoprotein
beta-1,4-N-acetylglucosaminyltransferase, isozyme B, mRNA (cDNA
clone IMAGE:3608546), partial cds.
ACCESSION BC009464
VERSION BC009464.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1796)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1796)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 23 Row: o Column: 8.
FEATURES Location/Qualifiers
source 1..1796
/db_xref="H-InvDB:HIT000034381"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3608546"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1796
/gene="MGAT4B"
/gene_synonym="GNT-IV"
/gene_synonym="GNT-IVB"
/db_xref="GeneID:11282"
/db_xref="HGNC:HGNC:7048"
/db_xref="IMGT/GENE-DB:7048"
/db_xref="MIM:604561"
CDS <1..1343
/gene="MGAT4B"
/gene_synonym="GNT-IV"
/gene_synonym="GNT-IVB"
/codon_start=3
/product="MGAT4B protein"
/protein_id="AAH09464.2"
/db_xref="GeneID:11282"
/db_xref="HGNC:HGNC:7048"
/db_xref="IMGT/GENE-DB:7048"
/db_xref="MIM:604561"
/translation="NGSHRHVLHLPTVFHHLPHLLAKESSLQPAVRVGQGRTGVSVVM
GIPSVRREVHSYLTDTLHSLISELSPQEKEDSVIVVLIAETDSQYTSAVTENIKALFP
TEIHSGLLEVISPSPHFYPDFSRLRESFGDPKERVRWRTKQNLDYCFLMMYAQSKGIY
YVQLEDDIVAKPNYLSTMKNFALQQPSEDWMILEFSQLGFIGKMFKSLDLSLIVEFIL
MFYRDKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFKPSLFQHVGTHSSLAGK
IQKLKDKDFGKQALRKEHVNPPAEVSTSLKTYQHFTLEKAYLREDFFWAFTPAAGDFI
RFRFFQPLRLERFFFRSGNIEHPEDKLFNTSVEVLPFDNPQSDKEALQEGRTATLRYP
RSPDGYLQIGSFYKGVAEGEVDPAFGPLEALRLSIQTDSPVWVILSEIFLKKAD"
BASE COUNT 376 a 557 c 508 g 355 t
ORIGIN
1 ggaacggctc acaccggcac gtgctgcacc tgcccaccgt cttccatcac ctgccacacc
61 tgctggccaa ggagagcagt ctgcagcccg cggtgcgcgt gggccagggc cgcaccggag
121 tgtcggtggt gatgggcatc ccgagcgtgc ggcgcgaggt gcactcgtac ctgactgaca
181 ctctgcactc gctcatctcc gagctgagcc cgcaggagaa ggaggactcg gtcatcgtgg
241 tgctgatcgc cgagactgac tcacagtaca cttcggcagt gacagagaac atcaaggcct
301 tgttccccac ggagatccat tctgggctcc tggaggtcat ctcaccctcc ccccacttct
361 accctgactt ctcccgcctc cgagagtcct ttggggaccc caaggagaga gtcaggtgga
421 ggaccaaaca gaacctcgat tactgcttcc tcatgatgta cgcgcagtcc aaaggcatct
481 actacgtgca gctggaggat gacatcgtgg ccaagcccaa ctacctgagc accatgaaga
541 actttgcact gcagcagcct tcagaggact ggatgatcct ggagttctcc cagctgggct
601 tcattggtaa gatgttcaag tcgctggacc tgagcctgat tgtagagttc attctcatgt
661 tctaccggga caagcccatc gactggctcc tggaccatat tctgtgggtg aaagtctgca
721 accccgagaa ggatgcgaag cactgtgacc ggcagaaagc caacctgcgg atccgcttca
781 aaccgtccct cttccagcac gtgggcactc actcctcgct ggctggcaag atccagaaac
841 tgaaggacaa agactttgga aagcaggcgc tgcggaagga gcatgtgaac ccgccagcag
901 aggtgagcac gagcctgaag acataccagc acttcaccct ggagaaagcc tacctgcgcg
961 aggacttctt ctgggccttc acccctgccg cgggggactt catccgcttc cgcttcttcc
1021 aacctctaag actggagcgg ttcttcttcc gcagtgggaa catcgagcac ccggaggaca
1081 agctcttcaa cacgtctgtg gaggtgctgc ccttcgacaa ccctcagtca gacaaggagg
1141 ccctgcagga gggccgcacc gccaccctcc ggtaccctcg gagccccgac ggctacctcc
1201 agatcggctc cttctacaag ggagtggcag agggagaggt ggacccagcc ttcggccctc
1261 tggaagcact gcgcctctcg atccagacgg actcccctgt gtgggtgatt ctgagcgaga
1321 tcttcctgaa aaaggccgac taagctgcgg gcttctgagg gtaccctgtg gccagccctg
1381 aagcccacat ttctgggggt gtcgtcactg ccgtccccgg agggccagat acggccccgc
1441 ccaaagggtt ctgcctggcg tcgggcttgg gccggcctgg ggtccgccgc tggcccggag
1501 gccctaggag ctggtgctgc ccccgcccgc cgggccgcgg aggaggcagg cggcccccac
1561 actgtgcctg aggcccggaa ccgttcgcac ccggcctgcc ccagtcaggc cgttttagaa
1621 gagcttttac ttgggcgccc gccgtctctg gcgcgaacac tggaatgcat atactacttt
1681 atgtgctgtg ttttttattc ttggatacat ttgatttttt cacgtaagtc cacatatact
1741 tctataagag cgtgacttgt aataaagggt taatgaagaa aaaaaaaaaa aaaaaa
//